Fig. 5
From: The pan-genome of Lactobacillus reuteri strains originating from the pig gastrointestinal tract
A maximum likelihood phylogenetic tree of the core genome alignment of 20 L. reuteri genomes. Concatenated core gene sequences were compared. The tree was bootstrapped with 1000 replicates, shown as percentages at each branch. Numbers I-VI represent the original MLSA-based groupings. The host origin of each strain is denoted in parenthesis after the strain name as follows: (h) human, (p) pig, (r) rodent and (s) sourdough