Table 1 L. reuteri strains used in this study for genome sequencing and for comparative genomics
From: The pan-genome of Lactobacillus reuteri strains originating from the pig gastrointestinal tract
Strain (alternative name) | Host | MLSTa group | Country of origin | Source |
|---|---|---|---|---|
ATCC 53608 | Pig | IV | Sweden | Stefan Roos |
lp167-67 | Pig | IV | Sweden | Stefan Roos |
pg-3b | Pig | IV | USA | Jens Walter |
I5007 | Pig | IVb | China | GenBank: CP006011-CP006017 |
20-2 | Pig | V | Germany | Wolfgang Souffrant |
3c6 | Pig | V | New Zealand | Gerald Tannock |
lpuph1 | Mouse | I | USA | JGI: 2506381017 |
TD1 | Rat | Ib | USA | GenBank: CP006603 |
100-23 | Rat | III | New Zealand | JGI: 2500069000 |
mlc3 | Mouse | III | USA | JGI: 2506381016 |
TMW1.112 | Sourdough | IIIb | Germany | JGI: 2534682347 |
TMW1.656 | Sourdough | IIIb | Germany | JGI: 2534682350 |
LTH2584 | Sourdough | IIIb | Germany | JGI: 2534682349 |
LTH5448 | Sourdough | Ib | Germany | JGI: 2571042361 |
JCM1112T (DSM20016T/F275) | Human | II | Germany | NCBI: NC_010609 |
ATCC PTA-6475 (MM4-1a) | Human | II | Finland | JGI: 2502171170 |
ATCC PTA-4659 (MM2-3) | Human | IIb | Finland | JGI: 2502171171 |
ATCC 55730 (SD2112) | Human | VI | Peru | NCBI: NC_015697-NC_015701 |
CF48-3a1 | Human | VIb | Finland | JGI: 2502171173 |