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Table 4 SNPs identified by strategy A using BHIT in soybean data

From: A Bayesian model for detection of high-order interactions among genetic variants in genome-wide association studies

Index

Interaction SNPs

Mapped gene

Gene annotation

1

Gm07_15667842_T_C

Glyma07g15930

Oxysterol-binding protein

Gm07_15662403_C_T

Glyma07g15960

Dehydrogenase EC/1.1.1.145/3-beta-hydroxy-Delta(5)-steroid dehydrogenase

2

Gm07_15667842_T_C

Glyma07g15930

Oxysterol-binding protein

Gm07_15662403_C_T

Glyma07g15960

Dehydrogenase EC/1.1.1.145/3-beta-hydroxy-Delta(5)-steroid dehydrogenase

Gm06_42883965_T_C

Glyma06g39891

glycerol-3-phosphate acyltransferase

3

Gm16_1481641_G_A

Glyma16g01950

ABI3/VP1 Transcription factor

Gm19_38897850_C_T

Glyma19g31120

Glutamate synthase (NADH)

Gm19_39737193_T_C

Glyma19g31960

AP2-EREBP Transcription factor