| Â | Complete | Partial |
|---|
Prots | Completeness(%) | Total | Average | Ortho(%) | Prots | Completeness(%) | Total | Average | Ortho(%) |
|---|
Group1 | 60 | 90.91 | 138 | 2.3 | 65 | 64 | 96.97 | 155 | 2.42 | 65.62 |
Group2 | 52 | 92.86 | 110 | 2.12 | 59.62 | 55 | 98.21 | 128 | 2.33 | 67.27 |
Group3 | 60 | 98.36 | 127 | 2.12 | 51.67 | 61 | 100 | 138 | 2.26 | 57.38 |
Group4 | 62 | 95.38 | 113 | 1.82 | 38.71 | 65 | 100 | 122 | 1.88 | 41.54 |
All | 234 | 94.35 | 488 | 2.09 | 53.42 | 245 | 98.79 | 543 | 2.22 | 57.55 |
- Group: Set of genes selected by Genis Parra; Prots: Number of 248 ultra-conserved CEGs present in the transcriptome; %Completeness: Percentage of 248 ultra-conserved CEGs present; Total = total number of CEGs present including putative orthologs; Average = average number of orthologs per CEG; % Ortho = percentage of detected CEGS that have more than 1 ortholog. ‘Complete’ refers to those predicted proteins in the set of 248 CEGs that when aligned to the transcriptome, give an alignment length that is 70 % of the protein length. If a protein was not complete but still exceeded a pre-computed minimal alignment score, then we called the protein ‘partial’. A protein that was deemed to be ‘Complete’ was then also included in the set of Partial matches
