Table 1 Number of genes reported in differential expression analysis by DESeq2 (P-adj < 0.05) and EdgeR (FDR < 0.05)

3 h

all

10

5

4

6

1

Up regulated

3

1

1

2

0

Down regulated

7

4

3

4

1

6 h

all

33

340

27

6

313

Up regulated

24

245

23

1

222

Down regulated

9

95

4

5

91

9 h

all

151

458

145

6

313

Up regulated

105

273

104

1

169

Down regulated

46

185

41

5

144

12 h

all

1059

1980

1038

21

942

Up regulated

623

1123

613

10

510

Down regulated

436

857

425

11

432

all

39

16

13

26

3

12 h no toxin

Up regulated

20

7

4

16

3

Down regulated

19

9

9

10

0