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Table 2 Number of differentially expressed probes between two breeds from the pairwise analysis

From: Exploring transcriptomic diversity in muscle revealed that cellular signaling pathways mainly differentiate five Western porcine breeds

FDR 0.1 %

DU-LR

DU-LWF

DU-LWM

DU-PI

LR-LWF

LR-LWM

LR-PI

LWF-LWM

LWF-PI

LWM-PI

Global

164

233

47

641

293

13

703

6a

732

67

Autosomes

110

168

37

517

193

1

493

0a

519

40

  1. aFDR 5 %
  2. The number of differentially expressed probes between two breeds is given (FDR 0.1 %) for the analysis of all transcripts or the transcripts localized on the autosomes. Breed codes are DU for Duroc, LR for Landrace, LWF for Large White dam line, LWM for Large White sire line, and PI for Piétrain