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Fig. 1 | BMC Genomics

Fig. 1

From: Comparative genomics of Pseudomonas fluorescens subclade III strains from human lungs

Fig. 1

Phylogenetic tree of the P. fluorescens strains in this study. Multi-locus sequence analysis of the following eight housekeeping genes was used to infer the phylogenetic tree: dnaE (DNA polymerase III alpha subuit); ppsA (phosphoenolpyruvate synthase); recA (Recombinase A); rpoB (RNA polymerase subunit beta); gyrB (DNA gyrase subunit B); guaA (GMP synthease); mutL (DNA mismatch repair protein); pyrC (pyrimidine biosynthetic enzyme dihydroorotase) and acsA (acetyl-CoA synthetase). The concatenated sequences were aligned with MAFFT as described in the materials and methods. Clinical strains are highlighted in red [80, 81]

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