Table 2 Quality statistics for RNA sequencing data
Data Set | Sample Name | Total Reads | Length (nt) | Q30a (%) | Total (Gb) |
|---|---|---|---|---|---|
Raw Data | Mock-inoculated 1 | 78 344 666 | 100 | 87.1 | 7.83 |
Mock-Inoculated 2 | 86 178 906 | 100 | 87.1 | 8.62 | |
Mock-Inoculated 3 | 82 271 364 | 100 | 87.1 | 8.23 | |
Inoculated 1 | 41 756 756 | 100 | 86.8 | 4.18 | |
Inoculated 2 | 71 697 894 | 100 | 87.1 | 7.17 | |
Inoculated 3 | 80 588 142 | 100 | 87.1 | 8.06 | |
Total | 440 837 728 | Â | Â | 44.08 | |
Pre-processed Data | Mock-inoculated 1 | 68 237 135 | 41–100 | 100.0 | 6.45 |
Mock-Inoculated 2 | 75 081 850 | 41–100 | 100.0 | 7.10 | |
Mock-Inoculated 3 | 71 683 022 | 41–100 | 100.0 | 6.77 | |
Inoculated 1 | 36 270 688 | 41–100 | 100.0 | 3.43 | |
Inoculated 2 | 62 484 245 | 41–100 | 100.0 | 5.90 | |
Inoculated 3 | 70 235 351 | 41–100 | 100.0 | 6.64 | |
Dataset 1 | Total | 383 992 290 | 41–100 | 100.0 | 36.29 |
Dataset 2 | Total | 248 994 870 | 41–100 | 100.0 | 23.53 |