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Table 2 Popular defense related genes responsive to rust infection and their regulating miRNA

From: MicroRNA-mediated susceptible poplar gene expression regulation associated with the infection of virulent Melampsora larici-populina

Targets miRNA
Annomation log2 miRNA Group log2
A20/AN1-like zinc finger family protein 1.16 miR855-p5 Gp3a −0.4
Aldehyde dehydrogenase 3H1 −1.02 PC-5p-1903277_1 Gp4a 0.18
ARM repeat superfamily protein 2.55 miR172j-p3 Gp3b 10.06
Auxin response factor 16 1.06 miR160e-5p Gp1a 0.25
BED zinc finger 0.55 miR858a-p3 Gp3b 10.06
Chaperone protein htpG family protein −1.19 PC-3p-2241919_1 Gp4a −10.88
Cysteine synthase D1 1.33 miR167a-p3 Gp3b −9.88
Cytochrome P450, family 82, subfamily G, polypeptide 1 1.11 miR482b-p5 Gp3a 11.06
Disease resistance protein (TIR-NBS-LRR class) −0.94 miR393b-p5 Gp3b −9.88
Dormancy/auxin associated family protein −1.29 miR396e-p3 Gp2b 10.06
Early nodulin-like protein 18 1.05 miR824-p3 Gp3a 2.18
ENTH domain-containing protein 0.54 miR171e-p5 Gp1a 1.77
F-box family protein −0.65 miR394-p3 Gp3b 10.06
Glutaredoxin family protein 0.58 miR6300 Gp2b −0.82
Glutaredoxin family protein 0.9 miR2606b-p3 Gp3a 0.18
Glutathione S-transferase 6 0.54 PC-3p-1909651_1 Gp4a −9.88
Histone superfamily protein 1.37 miR400-p5 Gp3a 11.64
Homeodomain-like superfamily protein −1.01 miR2655e-p3 Gp3b −10.14
HXXXD-type acyl-transferase family protein 0.81 miR6468 Gp1a −2.77
Jasmonate-zim-domain protein 1 −2.48 PC-3p-401772_2 Gp4a −1.4
Late embryogenesis abundant domain-containing protein/LEA domain-containing protein 1.02 miR394-p3 Gp3b 10.06
myo-inositol-1-phosphate synthase 2 1.29 miR5072-p3 Gp3a 10.06
Pathogenesis-related 4 −1.02 miR5517-p5 Gp3a 1.18
P-loop containing nucleoside triphosphate hydrolases superfamily protein 1.04 miR394-p3 Gp3b 10.06
PR5-like receptor kinase 0.5 miR394-p3 Gp3b 10.06
Proton gradient regulation 5 −1.04 miR156g-p5 Gp3b −9.88
RING/FYVE/PHD zinc finger superfamily protein 1.14 miR824-p3 Gp3a 2.18
TIR-NBS-LRR16 1 miR482a_2s Gp2a 1.18
Trichome birefringence-like 33 1.1 miR5293-p5 Gp3a −0.18
Wound-responsive family protein −1.57 miR394-p3 Gp3b 10.06
WRKY DNA-binding protein 11 0.79 miR2097-p3 Gp3a 10.06