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Table 2 Popular defense related genes responsive to rust infection and their regulating miRNA

From: MicroRNA-mediated susceptible poplar gene expression regulation associated with the infection of virulent Melampsora larici-populina

Targets

miRNA

Annomation

log2

miRNA

Group

log2

A20/AN1-like zinc finger family protein

1.16

miR855-p5

Gp3a

−0.4

Aldehyde dehydrogenase 3H1

−1.02

PC-5p-1903277_1

Gp4a

0.18

ARM repeat superfamily protein

2.55

miR172j-p3

Gp3b

10.06

Auxin response factor 16

1.06

miR160e-5p

Gp1a

0.25

BED zinc finger

0.55

miR858a-p3

Gp3b

10.06

Chaperone protein htpG family protein

−1.19

PC-3p-2241919_1

Gp4a

−10.88

Cysteine synthase D1

1.33

miR167a-p3

Gp3b

−9.88

Cytochrome P450, family 82, subfamily G, polypeptide 1

1.11

miR482b-p5

Gp3a

11.06

Disease resistance protein (TIR-NBS-LRR class)

−0.94

miR393b-p5

Gp3b

−9.88

Dormancy/auxin associated family protein

−1.29

miR396e-p3

Gp2b

10.06

Early nodulin-like protein 18

1.05

miR824-p3

Gp3a

2.18

ENTH domain-containing protein

0.54

miR171e-p5

Gp1a

1.77

F-box family protein

−0.65

miR394-p3

Gp3b

10.06

Glutaredoxin family protein

0.58

miR6300

Gp2b

−0.82

Glutaredoxin family protein

0.9

miR2606b-p3

Gp3a

0.18

Glutathione S-transferase 6

0.54

PC-3p-1909651_1

Gp4a

−9.88

Histone superfamily protein

1.37

miR400-p5

Gp3a

11.64

Homeodomain-like superfamily protein

−1.01

miR2655e-p3

Gp3b

−10.14

HXXXD-type acyl-transferase family protein

0.81

miR6468

Gp1a

−2.77

Jasmonate-zim-domain protein 1

−2.48

PC-3p-401772_2

Gp4a

−1.4

Late embryogenesis abundant domain-containing protein/LEA domain-containing protein

1.02

miR394-p3

Gp3b

10.06

myo-inositol-1-phosphate synthase 2

1.29

miR5072-p3

Gp3a

10.06

Pathogenesis-related 4

−1.02

miR5517-p5

Gp3a

1.18

P-loop containing nucleoside triphosphate hydrolases superfamily protein

1.04

miR394-p3

Gp3b

10.06

PR5-like receptor kinase

0.5

miR394-p3

Gp3b

10.06

Proton gradient regulation 5

−1.04

miR156g-p5

Gp3b

−9.88

RING/FYVE/PHD zinc finger superfamily protein

1.14

miR824-p3

Gp3a

2.18

TIR-NBS-LRR16

1

miR482a_2s

Gp2a

1.18

Trichome birefringence-like 33

1.1

miR5293-p5

Gp3a

−0.18

Wound-responsive family protein

−1.57

miR394-p3

Gp3b

10.06

WRKY DNA-binding protein 11

0.79

miR2097-p3

Gp3a

10.06