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Table 3 Statistics for trees with fixed number of leaf nodes

From: A maximum-likelihood approach for building cell-type trees by lifting

 

12-leaf

50-leaf

100-leaf

TPR

0.750

0.736

0.789

FPR

0.070

0.064

0.036

F

0.677

0.629

0.748

ACC

0.906

0.917

0.946

RF

1.3

5.900

12.20

  1. We simulate 10 random trees (data representation length is 1000) for each of kind of tree (12, 50 or 100 leaf tree) and ran the lifting algorithm (for α=0.1). We then calculated the following statistics shown in the table: True positive rate (TPR), False positive rate (FPR), F-score or F 1-score (F), Accuracy (ACC), RF distance (RF)
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BMC Genomics

ISSN: 1471-2164

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