RDDpred: a condition-specific RNA-editing prediction model from RNA-seq data

BMC Genomics

Table 1 Artefact simulation results: resulted from 10-times of iterations

	Mapped reads	Mapped sites	Raw SNPs	Unintended SNPs	Caller passed	Filtered
Trial.1	9,734,787	80,552,288	8,872,433	8,358,426	350,694	231,972
Trial.2	9,735,558	80,558,479	8,878,304	8,365,007	350,670	232,496
Trial.3	9,733,473	80,568,898	8,880,681	8,366,553	350,136	231,912
Trial.4	9,733,159	80,570,416	8,879,502	8,365,311	350,442	231,539
Trial.5	9,733,939	80,545,810	8,853,408	8,339,822	350,332	232,008
Trial.6	9,733,507	80,542,007	8,838,870	8,326,074	350,917	232,649
Trial.7	9,734,222	80,555,307	8,859,741	8,346,628	350,390	232,128
Trial.8	9,735,046	80,562,701	8,874,369	8,361,655	350,807	232,063
Trial.9	9,733,971	80,555,609	8,852,720	8,339,866	350,059	232,336
Trial.10	9,734,717	80,542,143	8,863,065	8,350,655	350,809	232,347
Average	9,734,238	80,555,366	8,865,309	8,352,000	350,526	232,145

ISSN: 1471-2164