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Table 1 Profiles of 4125 genes in chr3R of D. melanogaster

From: NMFP: a non-negative matrix factorization based preselection method to increase accuracy of identifying mRNA isoforms from RNA-seq data

# of subexons n

n≤2

3≤n≤10

11≤n≤15

16≤n≤20

n>20

Sum

 

1618 (39.2 %)

2132 (51.7 %)

232 (5.6 %)

79 (1.9 %)

64 (1.6 %)

4125

# of annotated isoforms q

q=1

q=2

q=3

q=4

q>4

Sum

 

2450 (59.4 %)

878 (21.3 %)

356 (8.6 %)

180 (4.4 %)

261 (6.3 %)

4125

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BMC Genomics

ISSN: 1471-2164

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