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Table 1 Sensitivity (SN), Positive Predictive Value (PPV) and Standard Deviation (SD) for MIs simulated onto chr10

From: Identifying micro-inversions using high-throughput sequencing reads

 

Dataset 1

Dataset 2

Coverage

MID

Gustaf

MID

Gustaf

 

SN

PPV

SN

PPV

SN

PPV

SN

PPV

2

0.692

0.900

0.423

0.688

0.741

0.976

0.333

0.783

4

0.732

0.911

0.339

0.760

0.840

0.932

0.506

0.872

6

0.782

0.871

0.359

0.718

0.782

0.935

0.427

0.810

8

0.870

0.918

0.403

0.689

0.784

0.916

0.302

0.824

10

0.771

0.857

0.239

0.703

0.877

0.932

0.351

0.800

20

0.767

0.904

0.233

0.667

0.849

0.914

0.267

0.705

30

0.859

0.886

0.188

0.514

0.821

0.912

0.254

0.627

40

0.781

0.860

0.250

0.588

0.820

0.907

0.230

0.603

50

0.781

0.856

0.211

0.654

0.837

0.906

0.266

0.616

60

0.835

0.857

0.264

0.563

0.863

0.900

0.231

0.509

SD

0.052

0.023

0.079

0.072

0.039

0.021

0.086

0.114