Table 3 Gene islands differentially present or absent across pathotypes

Island1

+

-

+

Absent in A^w

XAC0211

XAC71A_110067

gloA

Event 3

-

+

-

Unique to A^w

XAC3218_110003

avrGf1

Event 3

-

+

-

Unique to A^w

XAC3218_110004

Event 3

Island2

+

+

-

Absent in A*

XAC1101

XAC3218_260032

Event 4

-

-

+

Unique to A*

XAC71A_230028

Event 4

-

-

+

Unique to A*

XAC71A_230029

ccdB

Event 4

-

-

+

Unique to A*

XAC71A_230030

Event 4

-

-

+

Unique to A*

XAC71A_240006

Event 4

-

-

+

Unique to A*

XAC71A_240007

Event 4

-

-

+

Unique to A*

XAC71A_240008

Event 4

-

-

+

Unique to A*

XAC71A_240009

Event 4

Island3

+

+

-

Absent in A*

XAC1492

XAC3218_380022

+/−

+

-

Absent in A*

XAC3218_390001

+

+

-

Absent in A*

XAC1493

XAC3218_390002

+

+

-

Absent in A*

XAC1494

XAC3218_390003

orf2

+/−

+

-

Absent in A*

XAC3218_390004

+/−

+

-

Absent in A*

XAC3218_390005

+

+

-

Absent in A*

XAC1495

XAC3218_390006

xrvA

+/−

+

-

Absent in A*

XAC3218_390007

+

+

-

Absent in A*

XAC1496

XAC3218_390008

+

+

-

Absent in A*

XAC1497

XAC3218_390009

Event 5

+/−

+

-

Absent in A*

XAC3218_390010

Event 5

+/−

+

-

Absent in A*

XAC3218_390011

Event 5

+

+

-

Absent in A*

XAC1499

XAC3218_390012

Event 5

+

+

-

Absent in A*

XAC1500

XAC3218_390014

Event 5

+/−

+

-

Absent in A*

XAC3218_390015

Event 5

+/−

+

-

Absent in A*

XAC3218_390016

Event 5

+/−

+

-

Absent in A*

XAC3218_390017

Event 5

+/−

+

-

Absent in A*

XAC3218_390018

Event 5

+

+

-

Absent in A*

XAC1501

XAC3218_400002

Event 5

+

+

-

Absent in A*

XAC1502

XAC3218_400003

Event 5

+

+

-

Absent in A*

XAC1503

XAC3218_400004

Event 5

+

+

-

Absent in A*

XAC1506

XAC3218_400005

Event 5

+/−

+

-

Absent in A*

XAC3218_400006

Event 5

+/−

+

-

Absent in A*

XAC3218_400007

Event 5

+

+

-

Absent in A*

XAC1507

XAC3218_400008

mobL

Event 5

+

+/−

-

Absent in A*

XAC1508

XAC3218_400010

Event 5

+

+/−

-

Absent in A*

XAC1509

XAC3218_400011

Event 5

Island4

+

-

+

Absent in A^w

XAC4205

XAC71A_950084

Event 18

+

-

+/−

Absent in A^w

XAC4206

Event 18

+

-

+

Absent in A^w

XAC4209

XAC71A_960001

cvaB

Event 18

-

ψ

-

Unique to A^w

XAC3218_960285

Event 18

-

ψ

-

Unique to A^w

XAC3218_960286

Event 18

-

+

-

Unique to A^w

XAC3218_970001

Event 18

-

ψ

-

Unique to A^w

XAC3218_970002

Event 18

-

ψ

-

Unique to A^w

XAC3218_970003

Event 18