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Fig. 3 | BMC Genomics

Fig. 3

From: Updated sesame genome assembly and fine mapping of plant height and seed coat color QTLs using a new high-density genetic map

Fig. 3

Distributions of basic elements of the sesame genome in the current assembly. a Pseudomolecules. b Gene density (mRNA); the frequency of sites within gene regions per 500 kb ranged from 0.04 to 0.61. c DNA transposon element (TE) density; the frequency of sites within the DNA TE regions per 500 kb ranged from 0 to 0.22. d Retrotransposon element density; the frequency of sites per 500 kb within the retrotransposon element regions ranged from 0 to 0.71. e GC content; the ratio of GC sites per 100 kb ranged from 0.32 to 0.40. f SNP density; the frequency of sites within SNP regions per 100 kb ranged from 1 × 10−5 to 1 × 10−3. Circos software (http://circos.ca) was used to construct the diagram

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