Fig. 2
From: Genome-wide analysis of tomato NF-Y factors and their role in fruit ripening
Expression patterns of NF-Y genes in various tomato organs. RNA-seq expression data corresponding to fifty-nine tomato NF-Y genes were retrieved from The Genome Consortium (TGC) datasets [65] for further analysis. Twelve genes with no detectable transcripts in any tissue/organ were excluded from the heat map. In the heat map, the RPKM (Reads Per Kilobase of exon model per Million mapped reads) values were transformed to log2(value + 1). Thirteen genes are shown labeled with their subunit on the right corresponding to genes targeted for subsequent analysis. The expression in various tomato organs is shown, including bud, flower, leaf, root, F_1cm (fruit with a 1 cm diameter), F_2cm, F_3cm, MG (Mature Green), B (Breaker), B10 (Breaker + 10 days)