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Table 2 Information of bacterial isolation, pathogenicity type and genome assembly statistics for X. translucens strains

From: Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of Xanthomonas translucens

Strain name

Isolation

Pathogenicity typec

Assembly statistics

Year

Host origin

Place

Contig number

Genome size (bp)

N50 (bp)

Maximum contig length (bp)

Strains used in this study

 XT-4699a

1999

Wheat

KS,USA

A

1

4,561,137

NA

NA

 XT-Rocky

2009

Wheat

KS,USA

A

521

4,459,068

21,643

85,632

 XT8

1942

Barley

Canada

B

152

4,617,556

79,563

279,321

 XT123

1952

Barley

Canada

A

344

4,284,749

28,687

135,676

 XT130

1939

NA

Canada

A

329

4,654,290

95,229

230,109

 XT5523b

1966

Wheat

Canada

A

330

4,665,768

111,158

270,930

 XT5770

NA

NA

Canada

A

533

4,617,837

27,152

149,044

 XT5791

1969

Wheat

Canada

A

738

4,719,363

62,926

185,369

 B1

2013

Barley

ND,USA

B

642

4,824,098

28,186

96,565

 B2

2013

Barley

ND,USA

B

283

4,503,259

38,929

154,569

 P3

2009

Wheat

ND,USA

A

161

4,522,131

78,928

240,099

 LW16

2009

Wheat

ND,USA

A

325

4,600,125

33,769

145,918

 LB5

2009

Wheat

ND,USA

A

434

4,766,161

111,172

269,877

 LB10

2009

Wheat

ND,USA

A

157

4,543,985

98,403

211,728

 LG48

2009

Wheat

ND,USA

A

293

4,486,555

38,250

111,281

 LG54

2009

Wheat

ND,USA

A

213

4,623,672

123,210

274,463

 CS2

2009

Wheat

ND,USA

A

285

4,722,832

85,714

207,734

 CS22

2009

Wheat

ND,USA

A

129

4,605,395

95,219

274,395

 CR31

2009

Wheat

ND,USA

A

386

4,720,715

62,461

158,913

 CS4

2009

Wheat

ND,USA

A

498

4,779,534

37,460

107,554

Strains from references

 CFBP2541b

1941

Bromegrass

USA

A

31

4,515,938

1,399,657

1,809,000

 DSM18974b

1933

Barley

MN,USA

B

551

4,463,577

13,041

55,714

 DAR61454

1988

Wheat

Australia

A

404

4,452,091

27,210

121,856

 ART-Xtg29

NA

Forage grass

Switzerland

C

788

4,100,864

8376

37,754

  1. NA means not available or not applicable
  2. aindicates genome assembly with PacBio long-read sequencing
  3. bType strains
  4. cStrains virulent on wheat and barley are classified as pathogenicity type A, strains virulent only on barley are considered as type B and strains virulent on forage grass are assigned to type C