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Table 1 Analysis of small RNA sequences and degradome sequences from NJCMS1A and NJCMS1B

From: Identification of miRNAs and their targets by high-throughput sequencing and degradome analysis in cytoplasmic male-sterile line NJCMS1A and its maintainer NJCMS1B of soybean

Type small RNA-Seq Degradome-Seq
NJCMS 1A NJCMS 1B NJCMS 1A NJCMS 1B
Statistical Information Total tags 12104688 (100.00 %) 12096551 (100.00 %) 12351703 (100.00 %) 12671179 (100.00 %)
Clean tags 11974839 (98.93 %) 12058427 (99.68 %) 12288476 (99.49 %) 12613736 (99.55 %)
Genome Mapping Statistics Total Count of Clean Tags Total tags 11974839 (100.00 %) 12058427 (100.00 %) 12288476 (100.00 %) 12613736 (100.00 %)
Mapping to genome 9824678 (82.04 %) 9758494 (80.93 %) 10954689 (89.15 %) 11289967 (89.51 %)
Unique Count of Clean Tags Total tags 3668753 (100.00 %) 4122100 (100.00 %) 6332697 (100.00 %) 5445882 (100.00 %)
Mapping to genome 2687857 (73.26 %) 3142047 (76.22 %) 5500905 (86.87 %) 4663560 (85.63 %)