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Fig. 2 | BMC Genomics

Fig. 2

From: Comparison of normalization and differential expression analyses using RNA-Seq data from 726 individual Drosophila melanogaster

Fig. 2

Effect of removing low-expressed genes before or after read count normalization on differential gene expression. The cell plot shows the percentage of agreement between Workflow 1 and Workflow 2. a Generalized linear model using DESeq. b Generalized linear model using edgeR. c ANOVA using SAS. Abbreviations for normalization methods are the same as defined in Fig. 1

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BMC Genomics

ISSN: 1471-2164

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