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Table 2 Annotation and mapping summary for the 48 samples used in the QuickRNASeq test run

From: QuickRNASeq lifts large-scale RNA-seq data analyses to the next level of automation and interactive visualization

Sample

Subject

Tissue

Sex

Total_reads

Uniq_Ratea

Multi_Rateb

Unmap_Ratec

SRR607214

GTEX-N7MS

Blood

M

39769361

54.59

23.5

21.91

SRR615261

GTEX-N7MS

Blood Vessel

M

47785162

79.69

2.21

18.1

SRR603068

GTEX-N7MS

Brain

M

53339811

59.45

2.15

38.4

SRR821282

GTEX-N7MS

Esophagus

M

44678159

65.58

2.62

31.8

SRR608096

GTEX-N7MS

Heart

M

58482196

72.91

2.8

24.29

SRR612839

GTEX-N7MS

Muscle

M

52016412

70.81

2.37

26.82

SRR816609

GTEX-N7MS

Pituitary

M

38214685

62.27

2.37

35.36

SRR821518

GTEX-N7MS

Testis

M

61509101

83.31

3.85

12.84

SRR607679

GTEX-N7MS

Thyroid

M

80820067

51.37

2.38

46.25

SRR809283

GTEX-N7MT

Blood

F

48818685

64.62

10.77

24.61

SRR808044

GTEX-N7MT

Blood Vessel

F

44714926

81.42

2.92

15.66

SRR598671

GTEX-N7MT

Brain

F

45163430

70.26

3.12

26.62

SRR598509

GTEX-N7MT

Heart

F

44403911

71.19

4.3

24.51

SRR600784

GTEX-N7MT

Lung

F

28065576

76.74

2.3

20.96

SRR813208

GTEX-N7MT

Pancreas

F

53422565

72.34

4.37

23.29

SRR821573

GTEX-N7MT

Pituitary

F

54452379

85.61

3.52

10.87

SRR810945

GTEX-NFK9

Blood

M

41131423

60.85

18.12

21.03

SRR811819

GTEX-NFK9

Blood Vessel

M

49527122

85.48

2.81

11.71

SRR820689

GTEX-NFK9

Esophagus

M

33541344

81.35

3.4

15.25

SRR602106

GTEX-NFK9

Heart

M

65071994

80.04

4.76

15.2

SRR607166

GTEX-NFK9

Lung

M

58741362

76.22

2.91

20.87

SRR598044

GTEX-NFK9

Muscle

M

58643842

80.85

3.36

15.79

SRR614287

GTEX-NFK9

Nerve

M

47388876

70.58

2.4

27.02

SRR811029

GTEX-NFK9

Pancreas

M

51304957

71.95

7.01

21.04

SRR815280

GTEX-NFK9

Prostate

M

85593813

80.46

4.55

14.99

SRR820839

GTEX-NFK9

Testis

M

51113138

66.02

2.89

31.09

SRR603834

GTEX-NFK9

Thyroid

M

61642193

79.4

3.49

17.11

SRR808836

GTEX-NPJ8

Blood Vessel

M

53974446

80.59

3.31

16.1

SRR598124

GTEX-NPJ8

Brain

M

55608656

65.46

3.1

31.44

SRR817306

GTEX-NPJ8

Esophagus

M

62209065

79.22

3.9

16.88

SRR598148

GTEX-NPJ8

Heart

M

53693956

68.13

3.35

28.52

SRR603750

GTEX-NPJ8

Lung

M

25962857

67.55

3.24

29.21

SRR601695

GTEX-NPJ8

Muscle

M

96240522

43.22

1.77

55.01

SRR615790

GTEX-NPJ8

Nerve

M

61182017

58.84

2.45

38.71

SRR819771

GTEX-NPJ8

Pancreas

M

60265701

80.07

4.82

15.11

SRR807949

GTEX-NPJ8

Pituitary

M

95246707

85.12

3.44

11.44

SRR820234

GTEX-NPJ8

Prostate

M

60423220

79.72

3.97

16.31

SRR810899

GTEX-NPJ8

Testis

M

57950635

81.5

3.71

14.79

SRR602951

GTEX-NPJ8

Thyroid

M

100317976

38.72

2.1

59.18

SRR815494

GTEX-O5YT

Blood

M

61808169

65.24

4.9

29.86

SRR809785

GTEX-O5YT

Blood Vessel

M

60730604

86.73

2.59

10.68

SRR814003

GTEX-O5YT

Esophagus

M

64985455

85.69

3.07

11.24

SRR820316

GTEX-O5YT

Heart

M

66455677

81.96

2.79

15.25

SRR821525

GTEX-O5YT

Lung

M

56250586

78.65

2.75

18.6

SRR815044

GTEX-O5YT

Muscle

M

65449073

84.77

2.96

12.27

SRR812080

GTEX-O5YT

Nerve

M

58246823

86.85

3.1

10.05

SRR810761

GTEX-O5YT

Pancreas

M

64065959

73.8

5.49

20.71

SRR818850

GTEX-O5YT

Testis

M

64388347

84.18

3.52

12.3

  1. The samples are from the Genotype-Tissue Expression (GTEx) project [39, 40]
  2. aUniq_Rate, percentage of reads that were uniquely mapped. bMulti_Rate, percentage of reads mapped to multiple locations. cUnmap_Rate, percentage of unmapped reads