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Table 4 The top 20 most expressed genes from IZE library

From: De novo comparative transcriptome analysis provides new insights into sucrose induced somatic embryogenesis in camphor tree (Cinnamomum camphora L.)

Gene id

RPKM

Description

comp93556_c0

6688.14

Serine/threonine protein kinase

comp93739_c0

5087.09

Metallothionein-like protein 2a [Nelumbo nucifera]

comp96566_c0

4146.24

RhoA GTPase effector DIA/Diaphanous

comp110416_c0

3628.56

Xyloglucan endotransglucosylase/hydrolase [Rosa hybrid cultivar]

comp96556_c0

2666.02

Polyubiquitin [Cicer arietinum]

comp108680_c0

2444.65

AP2/ERF domain-containing transcription factor [Populus trichocarpa]

comp100175_c0

2423.43

PREDICTED: uncharacterized protein LOC100255094 [Vitis vinifera]

comp101234_c0

2370.67

Late embryogenesis abundant protein [Sesuvium portulacastrum]

comp103367_c0

2199.46

Tubulin alpha-7 chain [Medicago truncatula]

comp57982_c0

2142.17

Glycine-rich RNA-binding protein GRP1A [Sinapis alba]

comp101258_c0

2040.98

Bowman-Birk type proteinase inhibitor [Lupinus albus]

comp110065_c1

1625.20

Cytochrome P450, putative [Ricinus communis]

comp109418_c0

1523.87

Heat-shock protein, putative [Ricinus communis]

comp30496_c0

1483.98

Translationally controlled tumor protein [Hevea brasiliensis]

comp97314_c0

1478.90

Hypothetical protein VITISV_035079 [Vitis vinifera]

comp101235_c0

1448.72

Annexin [Gossypium hirsutum]

comp109861_c0

1435.23

Heat shock cognate 70 kDa protein isoform 1 [Vitis vinifera]

comp110306_c3

1433.02

ADP-ribosylation factor [Medicago truncatula]

comp110306_c2

1345.93

Umecyanin [Armoracia rusticana]

comp109340_c0

1341.55

Cytochrome P450 89A2-like [Vitis vinifera]