Identification of the genes involved in odorant reception and detection in the palm weevil Rhynchophorus ferrugineus, an important quarantine pest, by antennal transcriptome analysis

Table 1 Comparative summary of R. ferrugineus, D. ponderosae and I. typographus antennal transcriptome sequencing assembly and annotation

	R. ferrugineus	D. ponderosae	I. typographus
Raw reads	194,157,678	SRR449538: 75,425 SRR449539: 525,846 SRR449540: 524,467	ERR169822 :341,518 ERR169829: 4,111,071
Raw reads	194,157,678	Total:1,125,738	Total: 4,452,589
Clean reads	183,355,534	SRR449538: 73,323 SRR449539: 504,320 SRR449540:504,853	ERR169822: 334,360 ERR169829: 3,084,804
Clean reads	183,355,534	Total: 1,082,496	Total: 3,419,164
Singletons/ Unassembled reads	65,445,353	205,887	1,796,851
Number of contigs	35,667	15,396	21,014
Scaffolded metrics		1^a	1^a
-N50	1557 bp	1,521 bp	622 bp
-average	857 bp	1,070 bp	529 bp
-Max	42211 bp	8,088 bp	5,386 bp
-Min	101 bp	41 bp	31 bp

1^a Scaffolding not possible, only 454 or Illumina single reads used for assembly

ISSN: 1471-2164