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Table 3 Fungal transcripts in treated and untreated oil palm seedlings

From: De novo transcriptome analyses of host-fungal interactions in oil palm (Elaeis guineensis Jacq.)

Putative functions of sequence Total number Number of transcripts in
   G T UT
Pathogenesis     
 Fungal allergen/elicitor 7 5 4 4
 immunomodulatory protein 1 1 0 0
 salicylate hydroxylase 2 1 1 1
Cell death-related     
 apoptosis-linked protein 1 1 0 0
 autophagy protein 3 3 2 2
 necrosis- and ethylene-inducing protein 1 1 0 0
 programmed cell death protein 1 1 0 0
Hydrogen scavenging     
 catalase 8 7 0 1
 Mn superoxide dismutase 6 5 2 1
 peroxiredoxin 5 5 1 1
Cell wall modification and degradation  
 α-amylase 3 3 0 0
 acetyl xylan esterase 8 5 2 3
 α-galactosidase 8 8 0 0
 arabinofuranosidase 3 3 0 0
 arabinogalactan endo-1,4-β-galactosidase 1 1 0 0
 β-glucosidase 9 9 0 0
 β-hexosaminidase 2 1 0 1
 carbohydrate esterase 15 13 1 2
 carbohydrate-binding module 9 6 2 5
 cellulase 20 17 7 7
 cellulose binding protein 4 3 1 2
 copper radical oxidase 9 4 3 4
 dye decolorizing peroxidase 3 2 0 1
 endo-1,3(4)-β-glucanase 13 3 11 11
 endo-1,4-β-glucanase 16 15 3 3
 endo-1,4-β-xylanase 10 7 6 7
 endo-β-mannanase 1 1 0 0
 endo-β-N-acetylglucosaminidase 7 7 0 0
 endogalactanase 1 1 0 0
 endo-polygalacturonase 1 1 1 0
 feruloyl esterase 5 5 1 1
 galactan 1,3-β-galactosidase 2 2 0 0
 glucan 1,3 β-glucosidase 4 3 2 3
 glycoside hydrolase family 186 127 21 36
 glycosyltransferase 51 44 9 12
 glyoxal oxidase 11 5 8 8
 laccase 11 10 0 1
 L-rhamnosidase 1 1 0 0
 manganese peroxidase 12 9 1 3
 pectinesterase 2 2 0 0
 polysaccharide lyase 7 7 0 0
 polysaccharide synthase 2 2 0 0
 rhamnogalacturonase 4 4 0 0
Fatty acid biosynthesis     
 3-ketoacyl-CoA thiolase 4 3 0 1
 3-methylcrotonyl-CoA carboxylase 2 2 0 0
 dihydroceramide δ (4)-desaturase 2 2 0 0
 fatty acid desaturase 22 17 8 11
 fatty acid elongase 2 2 0 0
 fatty acid hydroxylase 2 2 0 1
 fatty acid synthase 2 0 1 2
Phytosterol and steroid biosynthesis
 hydroxysteroid dehydrogenase 1 1 0 0
 lanosterol 14-α-demethylase 1 1 0 0
 mevalonate pyrophosphate decarboxylase 5 5 0 0
 sterol 14 α-demethylase 1 1 0 0
 sterol 24-C-methyltransferase 2 0 1 1
 sterol δ 5,6-desaturase 1 1 0 0
 sterol-binding protein 1 1 0 0
Detoxification     
 aflatoxin-detoxifizyme 1 1 0 0
 dienelactone hydrolase 4 4 0 0
Carbon metabolism     
 glycogen phosphorylase 1 1 0 0
 glycogen synthase 8 6 2 2
 trehalose synthase 5 5 0 0
Nitrogen metabolism     
 2-nitropropane dioxygenase 4 2 1 2
 NAD(P)H-nitrite reductase 1 1 0 0
 nitroreductase 3 3 0 0
Protein degradation     
 aspartic peptidase 16 11 2 9
 aspartic protease 3 2 0 1
 aspartic proteinase 1 1 0 0
 endopeptidase 3 3 0 1
 metalloproteinase 3 3 1 0
 tripeptidyl peptidase 2 2 0 0
Amino acid metabolism     
 aspartate aminotransferase 8 7 0 1
 glutamate decarboxylase 1 0 0 1
 glutamate dehydrogenase 16 15 0 1
 glutamine synthetase 14 10 10 11
Urea cycle     
 arginase 2 2 0 1
 argininosuccinate lyase 2 1 1 2
 argininosuccinate synthetase 3 3 0 0
 ornithine carbamoyltransferase 1 1 0 0
Nutrient transport     
 amino acid permease 15 9 8 8
 amino acid transporter 2 2 0 0
 ammonium transporter 3 2 2 2
 glucose transporter 13 10 8 7
 hexose transporter 14 10 11 12
 monosaccharide transporter 10 6 7 7
 multidrug transporter 8 6 1 2
 oligopeptide transporter 17 15 0 2
 peptide transporter 4 0 1 4
 phosphate transporter 25 14 13 18
 phospholipid transporter 2 0 0 2
 sterol carrier protein 1 1 0 0
 sugar transporter 7 5 2 2
 sulfate transporter 2 1 0 2