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Table 2 Digital PCR primers and probes for selected areas

From: Identification of genomic aberrations in hemangioblastoma by droplet digital PCR and SNP microarray highlights novel candidate genes and pathways for pathogenesis

Gene

Oligonucleotides

Sequence (5′-3′)

reporter

PTPN11

Forward primer

TTAGAGACAGGGTCCCACTCTTG

-

Reverse primer

GCTTGAGGATGCAGTAAGCTATGA

-

Probe

CCTGGCTGGAGTGCAGTGGCGT

FAM

CHECK2

Forward primer

CATTTTTCTCTTAGTATCTTTCTGGGAAT

-

Reverse primer

CATTTCTGAGCCCAGCAATACA

-

Probe

TCACAATCCAGGGCTACAGTAAGACCCATG

FAM

PTCH1

Forward primer

GCGTGCGAAGGTGGAGACT

-

Reverse primer

TCATTGGCCTCCCACTTGA

-

Probe

TGTCTTCTCCCCCATGTCGG

FAM

EGFR

Forward primer

AGGAGGAACAACGTGGAGACA

-

Reverse primer

GAGACACCGGAGCCACAGA

-

Probe

CCCAGAGGTGGAACGTTGGCCC

FAM

RNaseP

Forward primer

GATTTGGACCTGCGAGCG

-

Reverse primer

GCGGCTGTCTCCACAAGT

-

Probe

CTGACCTGAAGGCTCT

Hex