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Table 2 Top-5 significantly up- and down-regulated GOs between the samples

From: Transcriptomic analysis reveals the gene expression profile that specifically responds to IBA during adventitious rooting in mung bean seedlings

GO ID Total genes DEGs FDR Level Terms
IBA6:Wat6
Down-regulated
GO:0005576 1222 232 5.87E-38 2 extracellular region
GO:0016491 1856 291 1.34E-32 3 oxidoreductase activity
GO:0009521 79 49 3.74E-32 3 photosystem
GO:0015979 192 72 3.66E-29 4 photosynthesis
GO:0046906 485 119 7.40E-29 4 tetrapyrrole binding
Up-regulated
GO:0005730 378 103 1.06E-24 5 nucleolus
GO:0022613 200 70 2.29E-23 4 ribonucleoprotein complex biogenesis
GO:0042254 186 67 2.73E-23 5 ribosome biogenesis
GO:0009734 238 72 4.81E-20 6 auxin mediated signaling pathway
GO:0071365 247 72 4.35E-19 6 cellular response to auxin stimulus
IBA24:Wat24
Down-regulated
GO:0005840 538 161 2.51E-42 4 ribosome
GO:0003735 471 147 4.33E-41 3 structural constituent of ribosome
GO:0005198 606 161 1.42E-35 2 structural molecule activity
GO:0006412 671 157 8.65E-28 6 translation
GO:0030529 801 165 9.85E-23 3 ribonucleoprotein complex
Up-regulated
GO:0009734 238 54 6.20E-17 6 auxin mediated signaling pathway
GO:0071365 247 55 6.20E-17 6 cellular response to auxin stimulus
GO:0009733 367 68 7.03E-17 5 response to auxin stimulus
GO:0005618 654 87 1.06E-12 4 cell wall
GO:0030312 671 87 3.91E-12 3 external encapsulating structure
IBA24:IBA6
Down-regualted
GO:0042221 2287 297 6.01E-21 3 response to chemical stimulus
GO:0009719 1364 204 1.28E-20 3 response to endogenous stimulus
GO:0009725 1235 182 1.63E-17 4 response to hormone stimulus
GO:0009755 768 130 5.55E-17 5 hormone-mediated signaling pathway
GO:0010033 1584 215 5.55E-17 4 response to organic substance
Up-regulated
GO:0005576 1222 267 5.64E-39 2 extracellular region
GO:0015979 192 65 6.90E-18 4 photosynthesis
GO:0005618 654 133 2.56E-15 4 cell wall
GO:0030312 671 134 7.04E-15 3 external encapsulating structure
GO:0019684 82 34 7.93E-12 5 photosynthesis, light reaction
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BMC Genomics

ISSN: 1471-2164

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