Skip to main content

Table 3 Membrane channels differentially expressed across the abdominal and cardiac nervous system tissues.

From: De novo transcriptome assembly for the lobster Homarus americanus and characterization of differential gene expression across nervous system tissues

Type

Abbreviation

Annotation

Count

DE

Up

Down

Ca

CA2D1

Voltage-dependent Ca channel subunit alpha-2/delta-1

3

3

3

0

Ca

CACB2

Voltage-dependent L-type calcium channel subunit beta-2

3

3

3

0

Ca

CACB4

Voltage-dependent L-type calcium channel subunit beta-4

3

3

3

0

Cl

CLCA1

Calcium-activated chloride channel regulator 1

9

5

4

1

Cl

CLCA2

Calcium-activated chloride channel regulator 2

13

8

7

1

Cl

CLCA3

Calcium-activated chloride channel regulator 3

2

1

1

0

Cl

CLCA4

Calcium-activated chloride channel regulator 4

7

3

3

0

Cl

CLCN2

Chloride channel protein 2 ClC-2

5

4

4

0

Cl

ECLC

Epithelial chloride channel protein

6

4

3

1

Cl

GLUCL

Glutamate-gated chloride channel

18

5

5

0

K

KCNAL

Potassium voltage-gated channel protein Shal

1

1

1

0

K

KCNKA

Potassium channel subfamily K member 10

2

1

1

0

K

ORK1

Open rectifier potassium channel protein 1

4

2

2

0

K

SLO

Calcium-activated potassium channel slowpoke

16

7

7

0

K

SLO1

Calcium-activated potassium channel slo-1

3

3

3

0

Na

SCNA

Sodium channel protein para

14

6

6

0

Cl

predicted

Epithelial chloride channel protein-like (Gallus gallus)

1

1

0

1

K

IRK2

Inward rectifier potassium channel 2

2

2

0

2

K

IRK11

Inward rectifier potassium channel 11

2

2

0

2

  1. Count is the number of transcripts annotating to a channel type; DE indicates the number of transcripts differentially expressed in abdominal compared to heart tissues (adj p < 0.05); up and down signify the number of DE transcripts upregulated (positive log2fold change) or downregulated (negative log2fold change), respectively