TY - JOUR AU - Stacey, G. AU - Vodkin, L. AU - Parrott, W. A. AU - Shoemaker, R. C. PY - 2004 DA - 2004// TI - National science foundation-sponsored workshop report. Draft plan for soybean genomics JO - Plant Physiol VL - 135 UR - https://doi.org/10.1104/pp.103.037903 DO - 10.1104/pp.103.037903 ID - Stacey2004 ER - TY - BOOK AU - Sprent, J. I. PY - 2001 DA - 2001// TI - Nodulation in legumes PB - Royal Botanic Gardens CY - Kew ID - Sprent2001 ER - TY - JOUR AU - Dogan, E. AU - Kirnak, H. AU - Copur, O. PY - 2007 DA - 2007// TI - Deficit irrigations during soybean reproductive stages and CROPGRO-soybean simulations under semi-arid climatic treatments JO - Field Crop Res VL - 103 UR - https://doi.org/10.1016/j.fcr.2007.05.009 DO - 10.1016/j.fcr.2007.05.009 ID - Dogan2007 ER - TY - JOUR AU - Yamaguchi, M. AU - Sharp, R. E. PY - 2010 DA - 2010// TI - Complexity and coordination of root growth at low water potentials: recent advances from transcriptomic and proteomic analyses JO - Plant Cell Environ VL - 33 UR - https://doi.org/10.1111/j.1365-3040.2009.02064.x DO - 10.1111/j.1365-3040.2009.02064.x ID - Yamaguchi2010 ER - TY - STD TI - Lenssen A. Soybean response to drought. Integrated Crop Management News Online. Iowa State University Extension. 2012. http://crops.extension.iastate.edu/cropnews/2012/06/soybean-response-drought. Accessed 22 Jun 2012. UR - http://crops.extension.iastate.edu/cropnews/2012/06/soybean-response-drought ID - ref5 ER - TY - JOUR AU - Hirasawa, T. AU - Tanaka, K. AU - Miyamoto, D. AU - Takei, M. AU - Ishihara, K. PY - 1994 DA - 1994// TI - Effects of pre-flowering moisture deficits on dry matter production and ecophysiological characteristics in soybean plants under drought treatments during grain filling JO - Jpn J Crop Sci VL - 63 UR - https://doi.org/10.1626/jcs.63.721 DO - 10.1626/jcs.63.721 ID - Hirasawa1994 ER - TY - JOUR AU - Hoogenboom, G. AU - Peterson, C. M. AU - Huck, M. G. PY - 1987 DA - 1987// TI - Shoot growth rate of soybeans as affected by drought stress JO - Agron J VL - 79 UR - https://doi.org/10.2134/agronj1987.00021962007900040003x DO - 10.2134/agronj1987.00021962007900040003x ID - Hoogenboom1987 ER - TY - STD TI - Taylor HM, Burnett E, Booth GD. Taproot elongation rates of soybeans. Z. Acker Pflanzenbau Bd. 1978;146:33. ID - ref8 ER - TY - JOUR AU - Wang, G. AU - Zhu, Q. AU - Meng, Q. AU - Wu, C. PY - 2012 DA - 2012// TI - Transcript profiling during salt stress of young cotton (Gossypium hirsutum) seedlings via Solexa sequencing JO - Acta Physiol Plant VL - 34 UR - https://doi.org/10.1007/s11738-011-0809-6 DO - 10.1007/s11738-011-0809-6 ID - Wang2012 ER - TY - JOUR AU - Yu, S. AU - Zhang, F. AU - Yu, Y. AU - Zhang, D. AU - Zhao, X. AU - Wang, W. H. PY - 2012 DA - 2012// TI - Transcriptome profiling of dehydration stress in the Chinese cabbage (Brassica rapa L. ssp. pekinensis) by tag sequencing JO - Plant Mol Biol Rep VL - 30 UR - https://doi.org/10.1007/s11105-011-0313-6 DO - 10.1007/s11105-011-0313-6 ID - Yu2012 ER - TY - JOUR AU - Wang, X. AU - Liu, Y. AU - Jia, Y. AU - Gu, H. AU - Ma, H. AU - Yu, T. PY - 2012 DA - 2012// TI - Transcriptional responses to drought stress in root and leaf of chickpea seedling JO - Mol Biol Rep VL - 39 UR - https://doi.org/10.1007/s11033-012-1662-4 DO - 10.1007/s11033-012-1662-4 ID - Wang2012 ER - TY - JOUR AU - Shen, Y. AU - Zhang, Y. AU - Chen, J. AU - Lin, H. AU - Zhao, M. AU - Peng, H. PY - 2013 DA - 2013// TI - Genome expression profile analysis reveals important transcripts in maize roots responding to the stress of heavy metal Pb JO - Physiol Plant VL - 147 UR - https://doi.org/10.1111/j.1399-3054.2012.01670.x DO - 10.1111/j.1399-3054.2012.01670.x ID - Shen2013 ER - TY - JOUR AU - Zhou, Y. AU - Gao, F. AU - Liu, R. AU - Feng, J. AU - Li, H. PY - 2012 DA - 2012// TI - De novo sequencing and analysis of root transcriptome using 454 pyrosequencing to discover putative genes associated with drought tolerance in Ammopiptanthus mongolicus JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-266 DO - 10.1186/1471-2164-13-266 ID - Zhou2012 ER - TY - JOUR AU - Fan, X. D. AU - Wang, J. Q. AU - Yang, N. AU - Dong, Y. Y. AU - Liu, L. AU - Wang, F. W. PY - 2013 DA - 2013// TI - Gene expression profiling of soybean leaves and roots under salt, saline-alkali and drought stress by high-throughput Illumina sequencing JO - Gene VL - 512 UR - https://doi.org/10.1016/j.gene.2012.09.100 DO - 10.1016/j.gene.2012.09.100 ID - Fan2013 ER - TY - JOUR AU - Shin, J. H. AU - Vaughn, J. N. AU - Abdel-Haleem, H. AU - Chavarro, C. AU - Abernathy, B. AU - Kim, K. D. PY - 2015 DA - 2015// TI - Transcriptomic changes due to water deficit define a general soybean response and accession-specific pathways for drought avoidance JO - BMC Plant Biol VL - 15 UR - https://doi.org/10.1186/s12870-015-0422-8 DO - 10.1186/s12870-015-0422-8 ID - Shin2015 ER - TY - JOUR AU - Prince, S. J. AU - Joshi, T. AU - Mutava, R. N. AU - Syed, N. AU - Joao Vitor Mdos, S. AU - Patil, G. PY - 2015 DA - 2015// TI - Comparative analysis of the drought-responsive transcriptome in soybean lines contrasting for canopy wilting JO - Plant Sci VL - 240 UR - https://doi.org/10.1016/j.plantsci.2015.08.017 DO - 10.1016/j.plantsci.2015.08.017 ID - Prince2015 ER - TY - JOUR AU - Devi, M. J. AU - Sinclair, T. R. AU - Taliercio, E. PY - 2015 DA - 2015// TI - Comparisons of the effects of elevated vapor pressure deficit on gene expression in leaves among two fast-wilting and a slow-wilting soybean JO - PLoS One VL - 10 UR - https://doi.org/10.1371/journal.pone.0139134 DO - 10.1371/journal.pone.0139134 ID - Devi2015 ER - TY - JOUR AU - Ha, C. V. AU - Watanabe, Y. AU - Tran, U. T. AU - Le, D. T. AU - Tanaka, M. AU - Nguyen, K. H. PY - 2015 DA - 2015// TI - Comparative analysis of root transcriptomes from two contrasting drought-responsive Williams 82 and DT2008 soybean cultivars under normal and dehydration conditions JO - Front Plant Sci VL - 6 UR - https://doi.org/10.3389/fpls.2015.00551 DO - 10.3389/fpls.2015.00551 ID - Ha2015 ER - TY - JOUR AU - Seki, M. AU - Umezawa, T. AU - Urano, K. AU - Shinozaki, K. PY - 2007 DA - 2007// TI - Regulatory metabolic networks in drought stress responses JO - Curr Opin Plant Biol VL - 10 UR - https://doi.org/10.1016/j.pbi.2007.04.014 DO - 10.1016/j.pbi.2007.04.014 ID - Seki2007 ER - TY - JOUR AU - Peleg, Z. AU - Blumwald, E. PY - 2011 DA - 2011// TI - Hormone balance and abiotic stress tolerance in crop plants JO - Curr Opin Plant Biol VL - 14 UR - https://doi.org/10.1016/j.pbi.2011.02.001 DO - 10.1016/j.pbi.2011.02.001 ID - Peleg2011 ER - TY - JOUR AU - Xu, C. C. AU - Zou, Q. PY - 1993 DA - 1993// TI - Effect of drought on lipoxygenase activity, ethylene, and ethane formation in leaves of soybean plants JO - Acta Bot Sin VL - 35 ID - Xu1993 ER - TY - JOUR AU - Morgan, P. W. AU - Drew, M. C. PY - 1997 DA - 1997// TI - Ethylene and plant responses to stress JO - Physiol Plant VL - 100 UR - https://doi.org/10.1111/j.1399-3054.1997.tb03068.x DO - 10.1111/j.1399-3054.1997.tb03068.x ID - Morgan1997 ER - TY - JOUR AU - Schramm, F. AU - Larkindale, J. AU - Kiehlmann, E. AU - Ganguli, A. AU - Englich, G. AU - Vierling, E. PY - 2008 DA - 2008// TI - A cascade of transcription factor DREB2A and heat stress transcription factor HsfA3 regulates the heat stress response of Arabidopsis JO - Plant J VL - 53 UR - https://doi.org/10.1111/j.1365-313X.2007.03334.x DO - 10.1111/j.1365-313X.2007.03334.x ID - Schramm2008 ER - TY - JOUR AU - Ding, Z. AU - Li, S. AU - An, X. AU - Liu, X. AU - Qin, H. AU - Wang, D. PY - 2009 DA - 2009// TI - Transgenic expression of MYB15 confers enhanced sensitivity to abscisic acid and improved drought tolerance in Arabidopsis thaliana JO - J Genet Genomics VL - 36 UR - https://doi.org/10.1016/S1673-8527(09)60003-5 DO - 10.1016/S1673-8527(09)60003-5 ID - Ding2009 ER - TY - JOUR AU - Do, J. H. AU - Choi, D. K. PY - 2008 DA - 2008// TI - Clustering approaches to identifying gene expression patterns from DNA microarray data JO - Mol Cells VL - 25 ID - Do2008 ER - TY - JOUR AU - Tavazoie, S. AU - Hughes, J. D. AU - Campbell, M. J. AU - Cho, R. J. AU - Church, G. M. PY - 1999 DA - 1999// TI - Systematic determination of genetic network architecture JO - Nat Genet VL - 22 UR - https://doi.org/10.1038/10343 DO - 10.1038/10343 ID - Tavazoie1999 ER - TY - JOUR AU - Ramireddy, E. AU - Chang, L. AU - Schmülling, T. PY - 2014 DA - 2014// TI - Cytokinin as a mediator for regulating root system architecture in response to environmental cues JO - Plant Signal Behav VL - 9 UR - https://doi.org/10.4161/psb.27771 DO - 10.4161/psb.27771 ID - Ramireddy2014 ER - TY - JOUR AU - Klucher, K. M. AU - Chow, H. AU - Reiser, L. AU - Fischer, R. L. PY - 1996 DA - 1996// TI - The AINTEGUMENTA gene of Arabidopsis required for ovule and female gametophyte development is related to the floral homeotic gene APETALA2 JO - Plant Cell VL - 8 UR - https://doi.org/10.1105/tpc.8.2.137 DO - 10.1105/tpc.8.2.137 ID - Klucher1996 ER - TY - JOUR AU - Ma, J. AU - Li, M. Y. AU - Wang, F. AU - Tang, J. AU - Xiong, A. S. PY - 2015 DA - 2015// TI - Genome-wide analysis of Dof family transcription factors and their responses to abiotic stresses in Chinese cabbage JO - BMC Genomics VL - 16 UR - https://doi.org/10.1186/s12864-015-1242-9 DO - 10.1186/s12864-015-1242-9 ID - Ma2015 ER - TY - STD TI - He L, Su C, Wang Y, Wei Z. ATDOF5.8 protein is the upstream regulator of ANAC069 and is responsive to abiotic stress. Biochimie. 2015. doi: 10.1016/j.biochi.2014.12.017. ID - ref30 ER - TY - JOUR AU - Zhang, Y. AU - Zhao, L. AU - Li, H. AU - Gao, Y. AU - Li, Y. AU - Wu, X. PY - 2013 DA - 2013// TI - GmGBP1, a homolog of human ski interacting protein in soybean, regulates flowering and stress tolerance in Arabidopsis JO - BMC Plant Biol VL - 6 ID - Zhang2013 ER - TY - CHAP AU - Spollen, W. G. AU - Sharp, R. E. AU - Saab, I. N. AU - Wu, Y. ED - Smith, J. A. C. ED - Griffiths, H. PY - 1993 DA - 1993// TI - Regulation of cell expansion in roots and shoots at low water potentials BT - Water deficits, plant responses from cell to community PB - Bios Scientific CY - Oxford ID - Spollen1993 ER - TY - JOUR AU - Urano, K. AU - Kurihara, Y. AU - Seki, M. AU - Shinozaki, K. PY - 2010 DA - 2010// TI - ‘Omics’ analyses of regulatory networks in plant abiotic stress responses JO - Curr Opin Plant Biol VL - 13 UR - https://doi.org/10.1016/j.pbi.2009.12.006 DO - 10.1016/j.pbi.2009.12.006 ID - Urano2010 ER - TY - JOUR AU - Wu, W. AU - Zhang, Q. AU - Zhu, Y. AU - Lam, H. M. AU - Cai, Z. AU - Guo, D. PY - 2008 DA - 2008// TI - Comparative metabolic profiling reveals secondary metabolites correlated with soybean salt tolerance JO - J Agric Food Chem VL - 56 UR - https://doi.org/10.1021/jf8024024 DO - 10.1021/jf8024024 ID - Wu2008 ER - TY - JOUR AU - Yamaguchi, M. AU - Valliyodan, B. AU - Zhang, J. AU - Lenoble, M. E. AU - Yu, O. AU - Rogers, E. E. PY - 2010 DA - 2010// TI - Regulation of growth response to water stress in the soybean primary root. I. Proteomic analysis reveals region-specific regulation of phenylpropanoid metabolism and control of free iron in the elongation zone. JO - Plant Cell Environ VL - 33 UR - https://doi.org/10.1111/j.1365-3040.2009.02073.x DO - 10.1111/j.1365-3040.2009.02073.x ID - Yamaguchi2010 ER - TY - JOUR AU - Gábor, K. AU - Robert, L. AU - Gabriella, S. AU - Virág, S. AU - Lívia, S. S. AU - Gábor, G. PY - 2005 DA - 2005// TI - Genetic manipulation of proline levels affects antioxidants in soybean subjected to simultaneous drought and heat stresses JO - Physiol Plant VL - 124 UR - https://doi.org/10.1111/j.1399-3054.2005.00504.x DO - 10.1111/j.1399-3054.2005.00504.x ID - Gábor2005 ER - TY - JOUR AU - Valliyodan, B. AU - Nguyen, H. T. PY - 2006 DA - 2006// TI - Understanding regulatory networks and engineering for enhanced drought tolerance in plants JO - Curr Opin Plant Biol VL - 9 UR - https://doi.org/10.1016/j.pbi.2006.01.019 DO - 10.1016/j.pbi.2006.01.019 ID - Valliyodan2006 ER - TY - JOUR AU - Taji, T. AU - Ohsumi, C. AU - Iuchi, S. AU - Seki, M. AU - Kasuga, M. AU - Kobayashi, M. PY - 2002 DA - 2002// TI - Important roles of drought- and cold-inducible genes for galactinol synthase in stress tolerance in Arabidopsis thaliana JO - Plant J VL - 29 UR - https://doi.org/10.1046/j.0960-7412.2001.01227.x DO - 10.1046/j.0960-7412.2001.01227.x ID - Taji2002 ER - TY - JOUR AU - Nishizawa, A. AU - Yabuta, Y. AU - Shigeoka, S. PY - 2008 DA - 2008// TI - Galactinol and raffinose constitute a novel function to protect plants from oxidative damage JO - Plant Physiol VL - 147 UR - https://doi.org/10.1104/pp.108.122465 DO - 10.1104/pp.108.122465 ID - Nishizawa2008 ER - TY - JOUR AU - Todaka, D. AU - Matsushima, H. AU - Morohashi, Y. PY - 2000 DA - 2000// TI - Water stress enhances beta-amylase activity in cucumber cotyledons JO - J Exp Bot VL - 51 UR - https://doi.org/10.1093/jexbot/51.345.739 DO - 10.1093/jexbot/51.345.739 ID - Todaka2000 ER - TY - JOUR AU - Kaplan, F. AU - Guy, C. L. PY - 2004 DA - 2004// TI - beta-Amylase induction and the protective role of maltose during temperature shock JO - Plant Physiol VL - 135 UR - https://doi.org/10.1104/pp.104.040808 DO - 10.1104/pp.104.040808 ID - Kaplan2004 ER - TY - JOUR AU - Gargallo-Garriga, A. AU - Sardans, J. AU - Pérez-Trujillo, M. AU - Rivas-Ubach, A. AU - Oravec, M. AU - Vecerova, K. PY - 2014 DA - 2014// TI - Opposite metabolic responses of shoots and roots to drought JO - Sci Rep VL - 4 UR - https://doi.org/10.1038/srep06829 DO - 10.1038/srep06829 ID - Gargallo-Garriga2014 ER - TY - JOUR AU - Kaplan, F. AU - Guy, C. L. PY - 2005 DA - 2005// TI - RNA interference of Arabidopsis beta-amylase8 prevents maltose accumulation upon cold shock and increases sensitivity of PSII photochemical efficiency to freezing stress JO - Plant J VL - 44 UR - https://doi.org/10.1111/j.1365-313X.2005.02565.x DO - 10.1111/j.1365-313X.2005.02565.x ID - Kaplan2005 ER - TY - JOUR AU - Gigon, A. AU - Matos, A. R. AU - Laffray, D. AU - Zuily-Fodil, Y. AU - Pham-Thi, A. T. PY - 2004 DA - 2004// TI - Effect of drought stress on lipid metabolism in the leaves of Arabidopsis thaliana (ecotype Columbia) JO - Ann Bot VL - 94 UR - https://doi.org/10.1093/aob/mch150 DO - 10.1093/aob/mch150 ID - Gigon2004 ER - TY - JOUR AU - Perera, I. Y. AU - Hung, C. Y. AU - Moore, C. D. AU - Stevenson-Paulik, J. AU - Boss, W. F. PY - 2008 DA - 2008// TI - Transgenic Arabidopsis plants expressing the type 1 inositol 5-phosphatase exhibit increased drought tolerance and altered abscisic acid signaling JO - Plant Cell VL - 20 UR - https://doi.org/10.1105/tpc.108.061374 DO - 10.1105/tpc.108.061374 ID - Perera2008 ER - TY - JOUR AU - Moura, J. C. AU - Bonine, C. A. AU - Oliveira Fernandes Viana, J. AU - Dornelas, M. C. AU - Mazzafera, P. PY - 2010 DA - 2010// TI - Abiotic and biotic stresses and changes in the lignin content and composition in plants JO - J Integr Plant Biol VL - 52 UR - https://doi.org/10.1111/j.1744-7909.2010.00892.x DO - 10.1111/j.1744-7909.2010.00892.x ID - Moura2010 ER - TY - JOUR AU - Yang, L. AU - Wang, C. C. AU - Guo, W. D. AU - Li, X. B. AU - Lu, M. AU - Yu, C. L. PY - 2006 DA - 2006// TI - Differential expression of cell wall related genes in the elongation zone of riceroots under water deficit JO - Russ J Plant Physiol VL - 53 UR - https://doi.org/10.1134/S1021443706030150 DO - 10.1134/S1021443706030150 ID - Yang2006 ER - TY - JOUR AU - Yoshimura, K. AU - Masuda, A. AU - Kuwano, M. AU - Yokota, A. AU - Akashi, K. PY - 2008 DA - 2008// TI - Programmed proteome response for drought avoidance/tolerancein the root of a C-3 xerophyte (wild watermelon) under water deficits JO - Plant Cell Physiol VL - 49 UR - https://doi.org/10.1093/pcp/pcm180 DO - 10.1093/pcp/pcm180 ID - Yoshimura2008 ER - TY - JOUR AU - Ronde, J. A. AU - Cress, W. A. AU - Krüger, G. H. AU - Strasser, R. J. AU - Staden, J. PY - 2004 DA - 2004// TI - Photosynthetic response of transgenic soybean plants, containing an Arabidopsis P5CR gene, during heat and drought stress JO - J Plant Physiol VL - 161 UR - https://doi.org/10.1016/j.jplph.2004.01.014 DO - 10.1016/j.jplph.2004.01.014 ID - Ronde2004 ER - TY - JOUR AU - Ronde, J. A. AU - Laurie, R. N. AU - Caetano, T. AU - Greyling, M. M. AU - Kerepesi, I. PY - 2004 DA - 2004// TI - Comparative study between transgenic and non-transgenic soybean lines proved transgenic lines to be more drought tolerant JO - Euphytica VL - 138 UR - https://doi.org/10.1023/B:EUPH.0000046806.68554.5b DO - 10.1023/B:EUPH.0000046806.68554.5b ID - Ronde2004 ER - TY - JOUR AU - Simon-Sarkadi, L. AU - Kocsy, G. AU - Várhegyi, A. AU - Galiba, G. AU - Ronde, J. A. PY - 2005 DA - 2005// TI - Genetic manipulation of proline accumulation influences the concentrations of other amino acids in soybean subjected to simultaneous drought and heat stress JO - J Agric Food Chem VL - 53 UR - https://doi.org/10.1021/jf050540l DO - 10.1021/jf050540l ID - Simon-Sarkadi2005 ER - TY - STD TI - Le DT, Nishiyama R, Watanabe Y, Tanaka M, Seki M, Ham le H, et al. Differential gene expression in soybean leaf tissues at late developmental stages under drought stress revealed by genome-wide transcriptome analysis. PLoS One. 2012. doi: 10.1371/journal.pone.0049522. ID - ref52 ER - TY - JOUR AU - Růzicka, K. AU - Ljung, K. AU - Vanneste, S. AU - Podhorská, R. AU - Beeckman, T. AU - Friml, J. PY - 2007 DA - 2007// TI - Ethylene regulates root growth through effects on auxin biosynthesis and transport-dependent auxin distribution JO - Plant Cell VL - 19 UR - https://doi.org/10.1105/tpc.107.052126 DO - 10.1105/tpc.107.052126 ID - Růzicka2007 ER - TY - JOUR AU - Tsuchisaka, A. AU - Theologis, A. PY - 2004 DA - 2004// TI - Unique and overlapping expression patterns among the Arabidopsis 1-amino-cyclopropane-1-carboxylate synthase gene family members JO - Plant Physiol VL - 136 UR - https://doi.org/10.1104/pp.104.049999 DO - 10.1104/pp.104.049999 ID - Tsuchisaka2004 ER - TY - JOUR AU - Ruyter-Spira, C. AU - Kohlen, W. AU - Charnikhova, T. AU - Zeijl, A. AU - Bezouwen, L. AU - Ruijter, N. PY - 2011 DA - 2011// TI - Physiological effects of the synthetic strigolactone analog GR24 on root system architecture in Arabidopsis: another belowground role for strigolactones? JO - Plant Physiol VL - 155 UR - https://doi.org/10.1104/pp.110.166645 DO - 10.1104/pp.110.166645 ID - Ruyter-Spira2011 ER - TY - JOUR AU - Rasmussen, A. AU - Mason, M. G. AU - Cuyper, C. PY - 2012 DA - 2012// TI - Strigolactones suppress adventitious rooting in Arabidopsis and pea JO - Plant Physiol VL - 158 UR - https://doi.org/10.1104/pp.111.187104 DO - 10.1104/pp.111.187104 ID - Rasmussen2012 ER - TY - JOUR AU - Koltai, H. PY - 2011 DA - 2011// TI - Strigolactones are regulators of root development JO - New Phytol VL - 190 UR - https://doi.org/10.1111/j.1469-8137.2011.03678.x DO - 10.1111/j.1469-8137.2011.03678.x ID - Koltai2011 ER - TY - JOUR AU - Wang, R. K. AU - Wang, C. E. AU - Fei, Y. Y. AU - Gai, J. Y. AU - Zhao, T. J. PY - 2013 DA - 2013// TI - Genome-wide identification and transcription analysis of soybean carotenoid oxygenase genes during abiotic stress treatments JO - Mol Biol Rep VL - 40 UR - https://doi.org/10.1007/s11033-013-2570-y DO - 10.1007/s11033-013-2570-y ID - Wang2013 ER - TY - JOUR AU - Shin, D. J. AU - Moon, S. J. AU - Han, S. AU - Kim, B. G. AU - Park, S. R. AU - Lee, S. K. PY - 2011 DA - 2011// TI - Expression of StMYB1R-1, a novel potato single MYB-like domain transcription factor increases drought tolerance JO - Plant Physiol VL - 155 UR - https://doi.org/10.1104/pp.110.163634 DO - 10.1104/pp.110.163634 ID - Shin2011 ER - TY - JOUR AU - Sugano, S. AU - Kaminaka, H. AU - Rybka, Z. AU - Catala, R. AU - Salinas, J. AU - Matsui, K. PY - 2003 DA - 2003// TI - Stress-responsive zinc finger gene ZPT2-3 plays a role in drought tolerance in petunia JO - Plant J VL - 36 UR - https://doi.org/10.1046/j.1365-313X.2003.01924.x DO - 10.1046/j.1365-313X.2003.01924.x ID - Sugano2003 ER - TY - JOUR AU - Yu, H. AU - Chen, X. AU - Hong, Y. Y. AU - Wang, Y. AU - Xu, P. AU - Ke, S. D. PY - 2008 DA - 2008// TI - Activated expression of an Arabidopsis HD-START protein confers drought tolerance with improved root system and reduced stomatal density JO - Plant Cell VL - 20 UR - https://doi.org/10.1105/tpc.108.058263 DO - 10.1105/tpc.108.058263 ID - Yu2008 ER - TY - JOUR AU - Liu, Q. AU - Kasuga, M. AU - Sakuma, Y. AU - Abe, H. AU - Miura, S. AU - Yamaguchi-Shino-zaki, K. PY - 1998 DA - 1998// TI - Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-respon-sive gene expression, respectively, in Arabidopsis JO - Plant Cell VL - 10 UR - https://doi.org/10.1105/tpc.10.8.1391 DO - 10.1105/tpc.10.8.1391 ID - Liu1998 ER - TY - JOUR AU - Jaglo-Ottosen, K. R. PY - 1998 DA - 1998// TI - Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance JO - Science VL - 280 UR - https://doi.org/10.1126/science.280.5360.104 DO - 10.1126/science.280.5360.104 ID - Jaglo-Ottosen1998 ER - TY - JOUR AU - Kasuga, M. AU - Liu, Q. AU - Miura, S. AU - Yamaguchi-Shinozaki, K. AU - Shinozaki, K. PY - 1999 DA - 1999// TI - Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor JO - Nat Biotechnol VL - 17 UR - https://doi.org/10.1038/7036 DO - 10.1038/7036 ID - Kasuga1999 ER - TY - JOUR AU - Polizel, A. M. AU - Medri, M. E. AU - Nakashima, K. AU - Yamanaka, N. AU - Farias, J. R. AU - Oliveira, M. C. PY - 2011 DA - 2011// TI - Molecular, anatomical and physiological properties of a genetically modified soybean line transformed with rd29A:AtDREB1A for the improvement of drought tolerance JO - Genet Mol Res VL - 10 UR - https://doi.org/10.4238/2011.October.21.4 DO - 10.4238/2011.October.21.4 ID - Polizel2011 ER - TY - JOUR AU - Paiva Rolla, A. A. AU - Fátima Corrêa Carvalho, J. AU - Fuganti-Pagliarini, R. AU - Engels, C. AU - Rio, A. AU - Marin, S. R. PY - 2014 DA - 2014// TI - Phenotyping soybean plants transformed with rd29A:AtDREB1A for drought tolerance in the greenhouse and field JO - Transgenic Res VL - 23 UR - https://doi.org/10.1007/s11248-013-9723-6 DO - 10.1007/s11248-013-9723-6 ID - Paiva Rolla2014 ER - TY - JOUR AU - Nishizawa, A. AU - Yabuta, Y. AU - Yoshida, E. AU - Maruta, T. AU - Yoshimura, K. AU - Shigeoka, S. PY - 2006 DA - 2006// TI - Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress JO - Plant J VL - 48 UR - https://doi.org/10.1111/j.1365-313X.2006.02889.x DO - 10.1111/j.1365-313X.2006.02889.x ID - Nishizawa2006 ER - TY - JOUR AU - Chinnusamy, V. AU - Ohta, M. AU - Kanrar, S. AU - Lee, B. H. AU - Hong, X. AU - Agarwal, M. PY - 2003 DA - 2003// TI - ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis JO - Genes Dev VL - 17 UR - https://doi.org/10.1101/gad.1077503 DO - 10.1101/gad.1077503 ID - Chinnusamy2003 ER - TY - JOUR AU - Wang, D. AU - Pan, Y. J. AU - Zhao, X. Q. AU - Zhu, L. H. AU - Fu, B. Y. AU - Li, Z. K. PY - 2011 DA - 2011// TI - Genome-wide temporal-spatial gene expression profiling of drought responsiveness in rice JO - BMC Genomics VL - 12 UR - https://doi.org/10.1186/1471-2164-12-149 DO - 10.1186/1471-2164-12-149 ID - Wang2011 ER - TY - JOUR AU - Todaka, D. AU - Nakashima, K. AU - Maruyama, K. AU - Kidokoro, S. AU - Osakabe, Y. AU - Ito, Y. PY - 2012 DA - 2012// TI - Rice phytochrome-interacting factor-like protein OsPIL1 functions as a key regulator of internode elongation and induces a morphological response to drought stress JO - Proc Natl Acad Sci U S A VL - 109 UR - https://doi.org/10.1073/pnas.1207324109 DO - 10.1073/pnas.1207324109 ID - Todaka2012 ER - TY - JOUR AU - Nagaoka, S. AU - Takano, T. PY - 2003 DA - 2003// TI - Salt tolerance‐related protein STO binds to a Myb transcription factor homologue and confers salt tolerance in Arabidopsis JO - J Exp Bot VL - 54 UR - https://doi.org/10.1093/jxb/erg241 DO - 10.1093/jxb/erg241 ID - Nagaoka2003 ER - TY - JOUR AU - Laurenzio, L. AU - Wysocka-Diller, J. AU - Malamy, J. E. AU - Pysh, L. AU - Helariutta, Y. AU - Freshour, G. PY - 1996 DA - 1996// TI - The SCARECROW gene regulates an asymmetric cell division that is essential for generating the radial organization of the Arabidopsis root JO - Cell VL - 86 UR - https://doi.org/10.1016/S0092-8674(00)80115-4 DO - 10.1016/S0092-8674(00)80115-4 ID - Laurenzio1996 ER - TY - JOUR AU - Helariutta, Y. AU - Fukaki, H. AU - Wysocka-Diller, J. AU - Nakajima, K. AU - Jung, J. AU - Sena, G. PY - 2000 DA - 2000// TI - The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling JO - Cell VL - 101 UR - https://doi.org/10.1016/S0092-8674(00)80865-X DO - 10.1016/S0092-8674(00)80865-X ID - Helariutta2000 ER - TY - JOUR AU - Fehr, W. R. AU - Caviness, C. E. AU - Burmood, D. T. AU - Pennington, J. S. PY - 1971 DA - 1971// TI - Stage of development descriptions for soybeans, Glycine max (L.) Merr JO - Crop Sci VL - 11 UR - https://doi.org/10.2135/cropsci1971.0011183X001100060051x DO - 10.2135/cropsci1971.0011183X001100060051x ID - Fehr1971 ER - TY - JOUR AU - Trapnell, C. AU - Pachter, L. AU - Salzberg, S. L. PY - 2009 DA - 2009// TI - TopHat: discovering splice junctions with RNA-Seq JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp120 DO - 10.1093/bioinformatics/btp120 ID - Trapnell2009 ER - TY - JOUR AU - Langmead, B. AU - Salzberg, S. L. PY - 2012 DA - 2012// TI - Fast gapped-read alignment with Bowtie 2 JO - Nat Methods VL - 9 UR - https://doi.org/10.1038/nmeth.1923 DO - 10.1038/nmeth.1923 ID - Langmead2012 ER - TY - JOUR AU - Trapnell, C. AU - Hendrickson, D. G. AU - Sauvageau, M. AU - Goff, L. AU - Rinn, J. L. AU - Pachter, L. PY - 2013 DA - 2013// TI - Differential analysis of gene regulation at transcript resolution with RNA-seq JO - Nat Biotechnol VL - 31 UR - https://doi.org/10.1038/nbt.2450 DO - 10.1038/nbt.2450 ID - Trapnell2013 ER - TY - JOUR AU - Joshi, T. AU - Fitzpatrick, M. R. AU - Chen, S. AU - Liu, Y. AU - Zhang, H. AU - Endacott, R. Z. PY - 2014 DA - 2014// TI - Soybean knowledge base (SoyKB): a web resource for integration of soybean translational genomics and molecular breeding JO - Nucleic Acids Res VL - 42 UR - https://doi.org/10.1093/nar/gkt905 DO - 10.1093/nar/gkt905 ID - Joshi2014 ER - TY - JOUR AU - Usadel, B. AU - Poree, F. AU - Nagel, A. AU - Lohse, M. AU - Czedik-Eysenberg, A. AU - Stitt, M. PY - 2009 DA - 2009// TI - A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize JO - Plant Cell Environ VL - 32 UR - https://doi.org/10.1111/j.1365-3040.2009.01978.x DO - 10.1111/j.1365-3040.2009.01978.x ID - Usadel2009 ER - TY - JOUR AU - Bailey, T. L. PY - 2011 DA - 2011// TI - DREME: Motif discovery in transcription factor ChIP-seq data JO - Bioinformatics VL - 27 UR - https://doi.org/10.1093/bioinformatics/btr261 DO - 10.1093/bioinformatics/btr261 ID - Bailey2011 ER - TY - JOUR AU - Gupta, S. AU - Stamatoyannopoulos, J. A. AU - Bailey, T. L. AU - Noble, W. S. PY - 2007 DA - 2007// TI - Quantifying similarity between motifs JO - Genome Biol VL - 8 UR - https://doi.org/10.1186/gb-2007-8-2-r24 DO - 10.1186/gb-2007-8-2-r24 ID - Gupta2007 ER - TY - JOUR AU - Livak, K. J. AU - Schmittgen, T. D. PY - 2001 DA - 2001// TI - Analysis of relative gene expression data using real-time quantitative PCR and the 2-[Delta][Delta]CT method JO - Methods VL - 25 UR - https://doi.org/10.1006/meth.2001.1262 DO - 10.1006/meth.2001.1262 ID - Livak2001 ER - TY - JOUR AU - Rozen, S. AU - Skaletsky, H. PY - 2000 DA - 2000// TI - Primer3 on the WWW for general users and for biologist programmers JO - Methods Mol Biol VL - 132 ID - Rozen2000 ER -