Fig. 2
From: Cascade: an RNA-seq visualization tool for cancer genomics
Screenshot of data rendering on main webpage. Cascade uses a space-saving menu on the left-hand side of the screen to store functions to: (a) select features of the RNA-seq data to be displayed, (b) select biological pathways to overlay data onto, (c) select datasets to use for visualization of features selected (using a) and (d) restrict the colouring thresholds for features based on custom or predefined disease gene lists. The “modify ranges” button (top centre) allows users to alter the cohort frequency thresholds (a) required for node colour changes (mutations) or ring appearance (splicing). Additional buttons (top) toggle display of guide rings, generate (.jpg) screen images or open tool documentation