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Table 2 Candidate critical genes with putative regulatory functions

From: RNA-seq analysis of the gonadal transcriptome during Alligator mississippiensis temperature-dependent sex determination and differentiation

Candidate transcriptional regulator
Gene ID Gene symbol Description Molecule type Expression Timespan
MPT Day 0 vs MPT Day 3
 XLOC_015643 CEBPA CCAAT/enhancer binding protein (C/EBP), alpha Transcription factor Up Short
 XLOC_013275 KDM6B Lysine (K)-specific demethylase 6B Transcription regulator Down Long
 XLOC_012144 LOC102562106 Protein Jumonji-like Transcription regulator Down Long
 XLOC_012145 LOC102561337 Protein Jumonji-like Transcription regulator Down Long
 XLOC_017186 CRABP2 Cellular retinoic acid binding protein 2 Transporter Down Short
 XLOC_017840 MYBL2 v-myb avian myeloblastosis viral oncogene homolog-like 2 Transcription factor Down Short
 XLOC_006860 LOC102569158 Protein Wnt-11-like, transcript variant X2 Other Down Short
MPT Day 3 vs MPT Day 6
 XLOC_006860 LOC102569158 Protein Wnt-11-like, transcript variant X2 Other Up Short
 XLOC_020119 TNNI2 Troponin I type 2 (skeletal, fast) Enzyme Up Short
 XLOC_009637 MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog Transcription factor Up Short
 XLOC_006593 LOC102560544 Elongation factor 1-alpha-like Other Up Short
 XLOC_003318 LOC102577358 Duplex and mab-3 related transcription factor 3-like Transcription factor Up Long
 XLOC_013828 LOC102573123 Transcription factor SOX-9-like Transcription factor Up Long
 XLOC_014546 LOC102576325 Serine/threonine-protein kinase PAK 1-like Protein kinase Up Long
 XLOC_015643 CEBPA CCAAT/enhancer binding protein (C/EBP), alpha Transcription factor Up Short
 XLOC_012336 SPTB Spectrin, beta, erythrocytic, cpytranscript variant X1 Other Up Short
 XLOC_018228 LOC102559361 Endothelin B receptor-like Receptor Down Ambiguous
 XLOC_003353 EMX1 Empty spiracles homeobox 1 Transcription factor Down Short
MPT Day 6 vs MPT Day 12
 XLOC_013828 LOC102573123 Transcription factor SOX-9-like Transcription factor Up Long
 XLOC_019721 HOXC10 Homeobox C10 Transcription factor Down Ambiguous
 XLOC_001928 ARX Aristaless related homeobox Transcription factor Down Long
FPT Day 0 vs FPT Day 3
 XLOC_003878 FABP4 Fatty acid binding protein 4, adipocyte Transporter Up Ambiguous
 XLOC_000567 LUM Lumican Other Up Short
 XLOC_012101 TAGLN3 Transgelin 3 Other Down Short
 XLOC_007693 FZD5 Frizzled family receptor 5 Receptor Down Short
 XLOC_017000 LOC102563625 cGMP-dependent 3′, 5′-cyclic phosphodiesterase-like Enzyme Down Short
FPT Day 6 vs FPT Day 12
 XLOC_001005 LOC102577040 Forkhead box protein L2-like Transcription factor Up Long
 XLOC_006272 EYA1 Eyes absent homolog 1 (Drosophila), transcript variant X1 Phosphatase Up Long