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Table 3 Southern bluefin tuna gonadal cells transcriptome assembly details

From: Transcriptome analysis reveals differentially expressed genes associated with germ cell and gonad development in the Southern bluefin tuna (Thunnus maccoyii)

Feature

Value

Assembled contigs (n)

128,065

Longest contig (bp)

20,234

Mean contig (bp)

1973

Contig N50 (bp)

2094

Contig N90 (bp)

1160

Total contig length (bp)

2.53×108

Assembly GC content (%)

42.22

Reads passed QCa (n)

1.48×109

Reads failed QC (n)

7.13×107

Mapped reads (n)

1.34×109

Average mapping rate (%)

95.51

  1. aQuality control (QC) of the raw sequenced reads was determined by FastQC
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BMC Genomics

ISSN: 1471-2164

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