Fig. 4

Analysis of differentially expressed genes detected in response to London spider mite strain with BH-adjusted P < 0.01. a Scatter plot of Log₂ Fold Changes detected in response to London and Murcia spider mite strains. b Parametric analysis of gene set enrichment (PAGE) network based on Biological Processes (BP) Gene Ontology (GO) annotation with significantly enriched up- and down-regulated gene sets. Nodes represent gene sets, edges indicate the overlap in genes belonging to connected gene sets. Gene sets: blue – down-regulated, red – up-regulated, gray – not detected as differentially regulated. Size corresponds to number of genes in a given gene set (5 to 163), correspondence between node labels and GO Term/ID is provided in Data S6. The color (gray to red) and width of the edges correspond to an overlap size (3 to 43)