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Table 3 Summary of Cmap by the percentage of query signatures producing informative connections

From: Fish connectivity mapping: linking chemical stressors by their mechanisms of action-driven transcriptomic profiles

Microarray platforms ZF 21K ZF 43K FHM 15K
ZF 21K 35/36 (97 %) 11/13 (85 %) 4/8 (50 %)
ZF 43K 6/12 (50 %) 36/36 (100 %) 5/10 (50 %)
FHM 15K 6/12 (50 %) 5/6 (83 %) 35/46 (76 %)
  1. An informative connection was established when a query signature shared the same or similar class of chemicals with at least one of the top five ROGL hits, as ranked by an adjusted connectivity score with a p-value ≤ 1/(S sets of ROGLs). All cross-platform/species Cmap were based on target probe IDs + source gene log-fold changes on shared chemical conditions. Only unique query signatures were considered in calculations