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Fig. 2 | BMC Genomics

Fig. 2

From: Genomic and transcriptomic analysis of carbohydrate utilization by Paenibacillus sp. JDR-2: systems for bioprocessing plant polysaccharides

Fig. 2

Comparison of gene expression of surface localized substrate specific glycoside hydrolases and their regulon associated solute binding protein. RPKM (Reads Per Kilobase per Million reads sequenced) values from transcriptomic studies following Pjdr2 growth on sweetgum GXn (SG), sorghum GAXn (SO), barley β-glucan (B) or starch (S) for the genes encoding the large multimodular surface anchored glycoside hydrolase and ABC transporter solute binding protein (SBP) which represents regulation for each of the three polysaccharides. A culture containing only 0.5 % yeast extract without carbohydrate (YE) served as control for comparison. Locus tag annotated as Pjdr2_#### abbreviated to only consist of the numeric portion, ####

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