|
All transcripts
|
High-count transcripts
|
Low-count transcripts
|
---|
|
Total
|
SB-only
|
BB-only
|
Total
|
Total
|
SB-only
|
BB-only
|
---|
No filter
|
2290
|
112
|
69
|
38
|
1325
|
112
|
69
|
RP filtering
|
2297
|
111
|
69
|
38
|
1327
|
111
|
69
|
CPM filtering
|
952
|
0
|
0
|
30
|
204
|
0
|
0
|
- The table contains the number of total transcripts, high-count transcripts and low-count transcripts declared DE using DESeq2 analyses on the complete dataset (i.e. no data filtering applied) or following data filtering based on reads-present (RP) criterion or counts per million (CPM) criterion. Also listed are transcripts with expression levels present in sand bluestem and absent in big bluestem (SB-only transcripts) and transcripts with expression levels present in big bluestem and absent in sand bluestem (BB-only transcripts)