Table 4 Characteristics of unique genes
From: Molecular foundations of chilling-tolerance of modern maize
Probe ID (MZxxxxxxxx) Gene ID (GRMZM2Gxxxxxx) Annotations (MaizeGDB) | Gene expression in control conditions by microarrays [log2(control)] |  |  | Gene expression in control conditions by RT-qPCR 2(ctk-ctK) |  |  | Cold-induced gene expression change by microarrays [log2(c/k)] |  |  | Cold-induced gene expression change by RT-qPCR [ΔΔ(CT)] |  |  |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
I | II | III | IV | V | ||||||||
| Â | S68911 | S50676 | S160 | S68911 | S50676 | S160 | S68911 | S50676 | S160 | S68911 | S50676 | S160 |
MZ00021278; GRMZM2G019907 MaizeCyc: Ocs-element binding factor 3. BP: regulation of transcription, DNA-dependent CC: nucleus | 8.14 | 6.88 | 6.85 | 0.0032 ± 0.0018 | 0.0014 ± 0.0008 | 0.0012 ± 0.0003 | -2.1a | -0.88 ns | -0.8 ns | -1.98 ± 0.67 | -0.71 ± 0.29 | -0.63 ± 0.05 |
MZ00026395; GRMZM2G331566 MaizeCyc: cellulase AT4G02290.1: glycosyl hydrolase 9B13 CC: extracellular region | 9.29 | 5.85 | 5.49 | 0.0417 ± 0.0173 | 0.0113 ± 0.0056 | 0.0006 ± 0.0002 | -1.63a | -0.69 ns | -0.38 ns | -1.64 ± 0.15 | -0.83 ± 0.47 | -0.33 ± 1.28 |
MZ00029516; GRMZM2G108576 AT3G06260.1(GATL4): galacturonosyltransferase-like 4 CC: Golgi apparatus | 8.38 | 6.64 | 5.14 | 0.2713 ± 0.1 | 0.0783 ± 0.056 | 0.0454 ± 0.0105 | -1.37a | -1.5a | -0.47 ns | -1.26 ± 0.45 | -1.54 ± 2.49 | -0.88 ± 0.07 |
MZ00056664; GRMZM2G176998 Gramene Annotations: Putative WD40-like beta propeller repeat family protein AT1G21680.1: DPP6 N-terminal domain-like protein CC: plant-type cell wall, extracellular region, vacuole | 10.5 | 6.67 | 6.18 | 0.2413 ± 0.1477 | 0.009 ± 0.001 | 0.0034 ± 0.0025 | -2.32a | 0.05 ns | -0.68 ns | -1.78 ± 1.07 | 0.28 ± 0.09 | -0.72 ± 0.2 |