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Table 1 Consensus binding sites enriched in FPs

From: High-throughput cis-regulatory element discovery in the vector mosquito Aedes aegypti

TF binding

Motif incidences

CG11617

2813

FOXA1

1225

SRY

1222

Optix

901

H2.0

845

Prrx

813

Ubx

773

ARID3A

723

Onecut

678

ct

670

Hunchback

641

cad

538

CG42234

538

PHDP

481

NFIC

345

Lim3

338

hbn

330

bap

312

slp1

312

Athb-1

222

SPI1

210

CG4328

204

E5

194

Lhx3

165

CG34031

160

Dr

160

Dll

155

HIF1A:ARNT

135

CF2-II

133

Vsx2

109

zen2

105

  1. Known transcription factor binding sites were found to be enriched in FPs (with respect to the entire A. aegypti genome). Motif incidences in FPs (>100) as determined by Clover are shown here. In each case, Clover shows a significant p value for enrichment of the motif in FPs with the genome sequence used as background sequences for comparison