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Table 1 Enriched biological process gene ontology terms. Analysis of up- and down-regulated genes (p < 0.01) for gene ontology term enrichment

From: Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica

Term FDR Representation
Up-regulated genes   
 Proteolysis 5.70E-07 over
 Translation 4.03E-06 under
 Ribosome biogenesis 1.84E-05 under
Down-regulated genes   
 Ribosome biogenesis 8.93E-21 over
 L-serine metabolic process 1.11E-06 over
 Glycine metabolic process 2.46E-05 over
 tRNA aminoacylation for protein translation 3.29E-05 over
 Lysine biosynthetic process 3.83E-05 over
 Isoleucine biosynthetic process 1.05E-04 over
 Regulation of translational initiation 1.87E-04 over
 Valine biosynthetic process 1.25E-03 over
 Leucine biosynthetic process 1.25E-03 over
 Glyoxylate metabolic process 1.50E-03 over
 Fatty acid β-oxidation 1.50E-03 over
 Cysteine biosynthetic process 9.89E-03 over
 Regulation of transcription, DNA-dependent 7.27E-04 under
 proteolysis 1.34E-03 under
  1. FDR false discovery rate after Fisher’s exact test