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Table 2 Regulatory proteins significantly changing in their abundance. Up- and down-regulated DNA binding proteins, kinases and phosphatases (p < 0.01). Best BlastP hits for S. cerevisiae and N. crassa are shown

From: Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica

   Change (Log2) Std. Dev. S. cerevisiae N. crassa
Gene Blast2GO annotation Gene Symbol Gene Symbol
Up-regulated        
YALI0F16511g dna-binding domain of mlu1-box binding protein mbp1 1.81 0.29 - - NCU06339 -
YALI0D20482g nitrogen regulatory protein area 1.05 0.28 YER040W GLN3 NCU09068 amr
YALI0E16577g zinc-finger inhibitor of ho transcription 0.87 0.12 YKL185W ASH1 - -
YALI0F18788g srf-type transcription factor 0.59 0.20 YBR182C SMP1 NCU02558 -
YALI0C22682g gata transcription factor 0.53 0.14 - - NCU15829 -
YALI0C11671g nucleosome binding protein 0.52 0.10 YBR089C-A NHP6B NCU09995 -
YALI0E28897g rna polymerase ii transcriptional coactivator 0.41 0.25 - - NCU04584 -
YALI0B20944g c6 finger domain 0.38 0.14 - - NCU07675 -
YALI0A09020g transcription factor 0.38 0.07 YNL257C SIP3 NCU00495 -
YALI0D17996g nhp10p 0.36 0.20 YDL002C NHP10 NCU07568 -
YALI0C19151g acetate regulatory dna binding protein 0.36 0.10 YMR280C CAT8 NCU06656 acu-15
YALI0E08184g cbf nf-y family transcription factor 0.34 0.09 YER159C BUR6 NCU06405 pole-3
YALI0C22187g membrane protein 0.34 0.10 YHR101C BIG1 - -
YALI0E18656g c6 finger domain 0.33 0.18 - - - -
YALI0E28721g ssdna binding protein 0.26 0.14 - - - -
YALI0F17468g potential fungal transcription factor 0.22 0.09 - - NCU05051 col-23
YALI0A21241g potential zinc finger protein 0.21 0.08 - - NCU02994 -
YALI0F11011g rme1p 0.19 0.09 YGR044C RME1 - -
YALI0A10637g fungal specific transcription factor domain-containing protein 0.19 0.06 - - NCU01478 -
YALI0F16852g lim homeobox protein 0.17 0.04 - - NCU03593 kal-1
YALI0D14542g camp-dependent protein kinase- 0.56 0.12 YHR205W SCH9 NCU03200 stk-10
YALI0C04587g protein kinase 0.53 0.22 YLL019C KNS1 NCU00230 prk-4
YALI0D07150g protein kinase 0.41 0.21 YKL116C PRR1 NCU04143 stk-26
YALI0D25388g serine threonine protein kinase 0.26 0.09 YGL180W ATG1 NCU00188 apg-1
YALI0D16863g casein kinase ii subunit alpha 0.23 0.06 YIL035C, YOR061W CKA1, CKA2 NCU03124 cka
YALI0B04840g serine threonine protein 0.17 0.08 YPL236C ENV7 NCU07399 stk-9
YALI0F12617g mitochondrially localized type 2c protein phosphatase 0.51 0.13 YHR076W PTC7 NCU02749 -
Down-regulated     
YALI0F15169g transcription factor −0.52 0.17 YBR083W TEC1 NCU02612 -
YALI0F05126g phosphorus acquisition-controlling protein −0.43 0.22 - - NCU09315 nuc-1
YALI0D05687g mgmt family protein −0.36 0.11 - - NCU11088 -
YALI0A17292g air2p −0.33 0.19 YDL175C AIR2 NCU04617 -
YALI0E30789g c2h2 finger domain −0.33 0.18 - - NCU06503 -
YALI0E03432g arc1p −0.31 0.10 YGL105W ARC1 NCU06307 -
YALI0D01573g cell pattern formation-associated protein stua −0.28 0.14 YMR016C SOK2 NCU01414 asm-1
YALI0B12166g multiprotein-bridging factor 1 −0.21 0.12 YOR298C-A MBF1 NCU01422 mbf1
YALI0D07744g YALI0D07744p −0.20 0.12 - - - -
YALI0F14267g stromal membrane-associated protein −0.15 0.09 YIL044C AGE2 NCU03890 -
YALI0D19470g mst3-like protein −0.60 0.30 YDR523C SPS1 NCU04096 prk-9
YALI0C00891g serine threonine protein kinase −0.52 0.15 YCR008W SAT4 NCU06179 stk-5
YALI0C21758g serine threonine protein kinase −0.40 0.18 YPL141C, YOR233W FRK1, KIN4 NCU00914 stk-16
YALI0C22770g pkinase-domain-containing protein −0.31 0.14 YNL298W, YOL113W CLA4, SKM1 NCU00406 Vel
YALI0E06501g agc akt protein kinase −0.19 0.10 YKL126W, YMR104C YPK1, YPK2 NCU07280 ypk1
YALI0B20438g phosphoserine phosphatase −0.34 0.10 YGR208W SER2 NCU02004 ser-3