Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors

Table 2 Protein set comparisons across Fusarium species

	Foc	Fom	Fop	Fob	Fol	Fsol	Fg	Fv
Total number of proteins	16,124	16,858	19,623	17,817	17,701	15,707	13,321	20,553
SSPs^a	537	580	620	588	597	426	483	621
Number of species specific proteins (including paralogs)	1090	863	832	1606	1825	2083	1632	1852
Number of unique species specific proteins^b	1058	808	785	1540	1645	1919	1622	1687

^aSmall secreted proteins
^bNo orthologs or paralogs in any of the other 43 spp. tested including all publicly available Fusarium spp.
Isolate details are as detailed in Additional file 5
Foc F. oxysporum f. sp. ciceris, Fom F. oxysporum f. sp. medicaginis, Fop F. oxysporum f. sp. pisi, Fob F. oxysporum 5176, Fol F. oxysporum f. sp. lycopersici, Fsol F. solani, Fg F. graminearum, Fv F. verticilliodes

ISSN: 1471-2164