Skip to main content

Table 2 Protein set comparisons across Fusarium species

From: Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors

  Foc Fom Fop Fob Fol Fsol Fg Fv
Total number of proteins 16,124 16,858 19,623 17,817 17,701 15,707 13,321 20,553
SSPsa 537 580 620 588 597 426 483 621
Number of species specific proteins (including paralogs) 1090 863 832 1606 1825 2083 1632 1852
Number of unique species specific proteinsb 1058 808 785 1540 1645 1919 1622 1687
  1. aSmall secreted proteins
  2. bNo orthologs or paralogs in any of the other 43 spp. tested including all publicly available Fusarium spp.
  3. Isolate details are as detailed in Additional file 5
  4. Foc F. oxysporum f. sp. ciceris, Fom F. oxysporum f. sp. medicaginis, Fop F. oxysporum f. sp. pisi, Fob F. oxysporum 5176, Fol F. oxysporum f. sp. lycopersici, Fsol F. solani, Fg F. graminearum, Fv F. verticilliodes