Fig. 5
From: Comparative genome analysis and genome evolution of members of the magnaporthaceae family of fungi
Selection and repetitive element proximity analysis. Clusters containing at least one gene from each species, M. oryzae, G. graminis var. tritici, and M. poae, were considered the core proteome. Clusters were analyzed using phylogenetic analysis by maximum likelihood (PAML) and determined to be under diversifying, purifying, or neutral selection. a Proportions of diversifying (red), purifying (green), and neutral (grey) clusters compared to the total number of clusters (left) were graphed. Clusters containing only a single gene from each species were parsed and proportions of diversifying, purifying, and neutral clusters were graphed (middle). Clusters containing more than one gene for at least one species were also parsed and graphed (right). b Distance to the closest repetitive element was identified for genes in diversifying and purifying clusters for M. oryzae (left), G. graminis var. tritici (middle), and M. poae (right). Black dots represent 5th and 95th percentiles. p-values were calculated using the Mann—Whitney Rank Sum test