Table 1 RNA samples for RNA-seq libraries. Each pool is made with equal amounts of RNA from 3 individual clams. Pools A and B were derived from the same clams
From: Clam focal and systemic immune responses to QPX infection revealed by RNA-seq technology
| Â | Library | Clams | Clam status | Tissue status | N paired-end reads |
|---|---|---|---|---|---|
Nodule | A1 | 1, 2, 3 | Diseased | Infection foci | 30,491,569 |
A2 | 4, 5, 6 | Diseased | Infection foci | 34,515,597 | |
A3 | 7, 8, 9 | Diseased | Infection foci | 46,861,893 | |
Non-nodule | B1 | 1, 2, 3 | Diseased | Non-lesion/Healthy | 27,119,432 |
B2 | 4, 5, 6 | Diseased | Non-lesion/Healthy | 28,254,720 | |
B3 | 7, 8, 9 | Diseased | Non-lesion/Healthy | 40,259,333 | |
Healthy | C1 | 10, 11, 12 | Healthy | Healthy | 36,714,347 |
C2 | 13, 14, 15 | Healthy | Healthy | 43,293,545 | |
C3 | 16, 17, 18 | Healthy | Healthy | 42,046,740 |