Skip to main content

Table 1 Information regarding newly sequenced strains

From: Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia

Genome

Accession #

Group

BoNT

Strain/alternate ID

BoNT cluster typea

BoNT cluster locationa

Genomic sitea

Year

Origin

Location

C. botulinum 20386

LFRD00000000

I

A1

VPI 7124

ha+

chr

oppA/BrnQ

 

soil

USA:Virginia

C. botulinum 20389

LFOO00000000

I

A1

ATCC 449

ha+

chr

oppA/BrnQ

   

C. botulinum 20412

LFOT00000000

I

A1

KF Meyer 126

ha+

chr

oppA/BrnQ

1921

spinach (FB)

USA:Indiana

C. botulinum 20414

LFOU00000000

I

A1

Prevot 910

ha+

chr

oppA/BrnQ

1953

bovine botulism

France

C. botulinum 20424

LFOV00000000

I

A1

Prevot Dewping

ha+

chr

oppA/BrnQ

   

C. botulinum 20427

LFOW00000000

I

A1

Prevot 697B

ha+

chr

oppA/BrnQ

1952

cat gut

Sweden

C. botulinum 20503

LFOY00000000

I

A1

McClung 844

ha+

chr

oppA/BrnQ

<1930

  

C. botulinum 20504

LFOZ00000000

I

A1

KF Meyer 33

ha+

chr

oppA/BrnQ

1920

ripe olives

USA:Tennessee

C. botulinum AM1295

LFPI00000000

I

A1

 

ha+

chr

oppA/BrnQ

 

suspected reference strain

 

C. botulinum U21312

LFQF00000000

I

A1

SU0729

orfX+

chr

arsC

1987

soil

Argentina

C. botulinum 10148

LFOK00000000

I

A1(B)

CDC 1744

A1-orfX+, (B)-ha+

chr

A1-arsC, (B)-oppB/BrnQ

1977

IB

USA:Pennsylvania

C. botulinum 20391

LFOP00000000

I

A1(B)

Hall 183

A1-orfX+, (B)-ha+

chr

A1-arsC, (B)-oppB/BrnQ

1922

corn (FB)

USA:Colorado

C. botulinum 20396

LFOQ00000000

I

A1(B)

Hall 4834

A1-orfX+, (B)-ha+

chr

A1-arsC, (B)-oppB/BrnQ

1931

spinach (FB)

USA:Nebraska

C. botulinum 20397

LFOR00000000

I

A1(B)

Hall 8388A

A1-orfX+, (B)-ha+

chr

A1-arsC, (B)-oppB/BrnQ

1935

chili pepper (FB)

USA:New Mexico

C. botulinum 20398

LFOS00000000

I

A1(B)

Hall 8857Ab

A1-orfX+, (B)-ha+

chr

A1-arsC, (B)-oppB/BrnQ

1935

corn (FB)

USA:Nebraska

C. botulinum Mauritius

LFPL00000000

I

A2

Mauritius

orfX+

chr

arsC

 

fish (FB)

Mauritius

C. botulinum U21063

LFPN00000000

I

A2

SU1937

orfX+

chr

arsC

2009

soil

Argentina

C. botulinum U21067

LFPQ00000000

I

A2

SU1274

orfX+

chr

arsC

1997

soil

Argentina

C. botulinum U21068

LFPR00000000

I

A2

SU1917

orfX+

chr

arsC

2009

soil

Argentina

C. botulinum U21069

LFPS00000000

I

A2

SU1887

orfX+

chr

arsC

2007

soil

Argentina

C. botulinum U21070

LFPT00000000

I

A2

SU1275

orfX+

chr

arsC

1997

soil

Argentina

C. botulinum U21075

LFPU00000000

I

A2

SU1934

orfX+

chr

arsC

2010

soil

Argentina

C. botulinum U21077

LFQY00000000

I

A2

SU1259

orfX+

chr

arsC

1996

soil

Argentina

C. botulinum U21078

LFQZ00000000

I

A2

SU1891

orfX+

chr

arsC

2007

soil

Argentina

C. botulinum U21082

LFPW00000000

I

A2

SU1054

orfX+

chr

arsC

1998

soil

Argentina

C. botulinum U21084

LFPX00000000

I

A2

SU1072

orfX+

chr

arsC

1998

soil

Argentina

C. botulinum U21086

LFPY00000000

I

A2

SU1064

orfX+

chr

arsC

1998

soil

Argentina

C. botulinum U21088

LFPZ00000000

I

A2

SU1074

orfX+

chr

arsC

1998

soil

Argentina

C. botulinum U21089

LFQA00000000

I

A2

SU1112

orfX+

chr

arsC

1995

soil

Argentina

C. botulinum U21306

LFRC00000000

I

A2

SU0801

orfX+

chr

arsC

2010

soil

Argentina

C. botulinum U21307

LFQB00000000

I

A2

SU0998

orfX+

chr

arsC

1994

soil

Argentina

C. botulinum U21309

LFQC00000000

I

A2

SU0807

orfX+

chr

arsC

1987

soil

Argentina

C. botulinum U21310

LFQD00000000

I

A2

SU0994

orfX+

chr

arsC

1994

soil

Argentina

C. botulinum U21311

LFQE00000000

I

A2

SU0634

orfX+

chr

arsC

1980

soil

Argentina

C. botulinum U21729

LFQG00000000

I

A2

SU0635W

orfX+

chr

arsC

 

soil

Argentina

C. botulinum U21064

LFPO00000000

I

A2f4

SU1306

A2-orfX+, F4-orfX+

chr

A2-arsC, F4-PulE

1998

soil

Argentina

C. botulinum U21076

LFPV00000000

I

A2f4

SU1304

A2-orfX+, F4-orfX+

chr

A2-arsC, F4-PulE

1998

soil

Argentina

C. botulinum U21087

LFRA00000000

I

A3

SU1169

orfX+

  

1998

soil

Argentina

C. botulinum U21181

LFRB00000000

I

A3

SU0945

orfX+

  

1992

soil

Argentina

C. botulinum 20497

LFOX00000000

I

B1

Hall 80

ha+

chr

oppA/BrnQ

1918

beans (FB)

USA:Illinois

C. botulinum 10159

LFOL00000000

I

B2

ATCC 17843 (B5)

ha+

chr

oppA/brnQ

   

C. botulinum 20506

LFQV00000000

I

B3

CDC 795

ha+

chr

oppA/BrnQ

  

USA:Michigan

C. botulinum 10258

LFON00000000

I

B5f2

An436

B5-ha+, F2-orfX+

plasmid

  

IB

Sweden

C. botulinum AM1195

LFPH00000000

I

B6

AM1195

ha+

plasmid

 

1987

IB

Australia

C. botulinum AM370

LFPJ00000000

I

B6

AM370

ha+

plasmid

 

1979

salted fish

Australia

C. botulinum AM553

LFPK00000000

I

B6

AM553

ha+

plasmid

 

1981

 

Australia

C. botulinum 20552

LFPF00000000

I

F1

Walls 8G

orfX+

chr

arsC

1968

crabs (ENV)

USA:Virginia

C. sp. U21066

LFPP00000000

I

NT

SU1575NT

   

1999

soil - colony variant of SU1575

Argentina

C. sporogenes U20719

LFPM00000000

I

NT

ATCC 19404

      

C. botulinum 20536

LFPA00000000

II

E1

CDC KA-95B

orfX+

chr

rarA

   

C. botulinum 20541

LFPB00000000

II

E1

L-572

orfX+

chr

rarA

 

forest soil

USA:Washington

C. botulinum 20547

LFPD00000000

II

E1

Prevot Ped 1

orfX+

chr

rarA

 

sea mud

Greenland

C. botulinum 20675

LFPG00000000

II

E1

ATCC 9564

orfX+

chr

rarA

1961

smoked salmon

Canada

C. botulinum K15

LFQW00000000

II

E1

K15

orfX+

chr

rarA

1995

trout

Finland

C. botulinum 20544

LFPC00000000

II

E2

CDC 5247

orfX+

chr

rarA

  

USA:Alaska

C. botulinum 10178

LFOM00000000

II

E3

211

orfX+

chr

rarA

 

lake sediment

Japan

C. botulinum 20549

LFPE00000000

II

E3

Prevot R81-3A

orfX+

chr

rarA

  

France

C. botulinum K3

LFQX00000000

II

E3

K3

orfX+

chr

rarA

1995

trout

Finland

C. sp. U20725

LFRG00000000

 

NT

ATCC 25772

      
  1. FB foodborne isolate, IB infant botulism case, ENV environmental isolate
  2. aputative information based upon draft genome assemblies