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Fig. 9 | BMC Genomics

Fig. 9

From: Next-generation genotyping of hypervariable loci in many individuals of a non-model species: technical and theoretical implications

Fig. 9

Sequence logo. This sequence logo [116] showing amino acid [AA] variation along the second exon of the ring-tailed lemur MHC-DRB gene. Letters represent standard AA abbreviations, letter height indicates the relative frequency in the population of each AA at that position, and letter color indicates the chemical properties of the AA: polar [green], neutral [purple], basic [blue], acidic [red], and hydrophobic [black]. * Identifies antigen-binding sites, assuming consensus with human DRB [117]. Gray boxes indicate positively selected sites calculated by models M2a & M8 in program PAML (Table 3: [91])

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BMC Genomics

ISSN: 1471-2164

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