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Table 1 Percent of rhesus exome reads aligned against different assemblies

From: Exome screening to identify loss-of-function mutations in the rhesus macaque for development of preclinical models of human disease

Sample ID

Sample accession

rheMac2 assembly chr only

MacaMv7 assembly chr only

rheMac2 assembly chr + unplaced

MacaMv7 assembly chr + unplaced

17573

SRX115899

94.28 %

97.03 %

96.74 %

97.57 %

ON12033

SRX144808

93.19 %

96.29 %

95.98 %

96.95 %

ON22186

SRX145282

92.62 %

96.21 %

95.84 %

96.95 %

002T-NHP

SRX144674

92.09 %

95.12 %

94.87 %

95.84 %

  1. Chr only alignments against only scaffolds placed on chromosomes; Chr + unplaced alignments against both placed and unplaced scaffolds