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Table 2 Variant calls for exomes aligned against rheMac2 and MacaM7 assemblies

From: Exome screening to identify loss-of-function mutations in the rhesus macaque for development of preclinical models of human disease

 

rheMac2

rheMac2

MacaM7

MacaM7

Variant

Het

Hom

Het

Hom

Animal 17573

 START_LOST

34

4

8

0

 STOP_GAINED

200

25

42

0

 STOP_LOST

86

70

5

0

 FRAME_SHIFT

394

669

100

4

 SPLICE_SITE_ACCEPTOR

59

49

27

0

 SPLICE_SITE_DONOR

70

38

28

3

Animal ON12033

 START_LOST

36

19

13

4

 STOP_GAINED

278

84

99

9

 STOP_LOST

71

132

6

3

 FRAME_SHIFT

618

722

232

29

 SPLICE_SITE_ACCEPTOR

74

68

45

11

 SPLICE_SITE_DONOR

91

71

50

13

Animal ON22186

 START_LOST

29

20

9

4

 STOP_GAINED

211

77

59

6

 STOP_LOST

68

116

10

0

 FRAME_SHIFT

484

778

188

24

 SPLICE_SITE_ACCEPTOR

69

64

33

14

 SPLICE_SITE_DONOR

73

60

34

13

Animal 002 T-NHP

 START_LOST

25

18

10

2

 STOP_GAINED

222

67

86

5

 STOP_LOST

55

112

10

1

 FRAME_SHIFT

505

654

228

27

 SPLICE_SITE_ACCEPTOR

77

57

52

6

 SPLICE_SITE_DONOR

84

60

48

10