Table 3 Target of pear-specific miRNAs in pear identified by degradome sequencing
ID | Gene | Cleavage Position | Category | Allan Score | P-Value | TAIR annotation | Gene description |
|---|---|---|---|---|---|---|---|
miRn1 | Pbr011776.1 | 240 | 2 | 2.5 | 0.05 | AT5G43630 | TZP |
miRn1 | Pbr018332.1 | 240 | 2 | 2.5 | 0.01 | AT5G43630 | TZP |
miRn4 | Pbr011743.1 | 328 | 0 | 2 | 0 | AT1G56510 | ACTIVATED DISEASE RESISTANCE 2 |
miRn6 | Pbr011682.2 | 253 | 2 | 1.5 | 0 | AT5G36930 | NA |
miRn6 | Pbr030895.1 | 271 | 2 | 2 | 0.01 | AT5G17680 | NA |
miRn8 | Pbr039988.1 | 1450 | 2 | 3 | 0.05 | AT1G54130 | RELA/SPOT HOMOLOG 3 |
miRn9 | Pbr038135.1 | 1057 | 2 | 3.5 | 0.02 | AT4G30110 | heavy metal atpase 2 |
miRn11 | Pbr000099.1 | 885 | 2 | 3.5 | 0.05 | AT1G12000 | NA |
miRn13 | Pbr027465.1 | 111 | 0 | 4.5 | 0.02 | AT3G25800 | PR 65 |
miRn18 | Pbr002749.2 | 2267 | 3 | 4 | 0.05 | AT4G10320 | NA |
miRn23 | Pbr009493.1 | 78 | 2 | 2.5 | 0 | AT2G29670 | NA |
miRn24 | Pbr026566.1 | 243 | 2 | 2 | 0.03 | AT4G24330 | NA |
miRn24 | Pbr004924.1 | 978 | 0 | 4 | 0.02 | AT3G52110 | NA |
miRn31 | Pbr036178.1 | 256 | 3 | 3.5 | 0.04 | AT3G26510 | NA |
miRn32 | Pbr006676.1 | 1157 | 0 | 4 | 0.02 | AT5G26710 | NA |
miRn38 | Pbr029169.1 | 420 | 3 | 4 | 0.04 | AT4G02040 | NA |
miRn38 | Pbr007316.1 | 420 | 3 | 4 | 0.04 | AT4G02040 | NA |
miRn41 | Pbr034171.1 | 167 | 3 | 3.5 | 0.02 | AT2G35680 | NA |
miRn41 | Pbr027934.1 | 1315 | 2 | 3 | 0.05 | AT5G64030 | NA |
miRn41 | Pbr024612.1 | 167 | 3 | 3.5 | 0.03 | AT2G35680 | NA |
miRn41 | Pbr013804.1 | 1105 | 3 | 3.5 | 0.01 | AT2G02955 | maternal effect embryo arrest 12 |
miRn41 | Pbr030334.1 | 899 | 0 | 4 | 0.02 | AT5G60770 | nitrate transporter 2.4 |
miRn41 | Pbr024607.1 | 167 | 3 | 3.5 | 0.01 | AT2G35680 | NA |
miRn41 | Pbr029396.1 | 167 | 3 | 3.5 | 0.03 | AT2G35680 | NA |
miRn46 | Pbr035452.1 | 735 | 3 | 3 | 0.02 | AT4G05320 | polyubiquitin 10 |
miRn54 | Pbr000659.1 | 966 | 2 | 2.5 | 0.02 | AT5G13030 | NA |
miRn54 | Pbr005201.1 | 1526 | 1 | 4 | 0 | AT5G35690 | NA |
miRn55 | Pbr009389.1 | 551 | 1 | 4.5 | 0.04 | AT3G12380 | actin-related protein 5 |
miRn57 | Pbr039571.2 | 962 | 2 | 2.5 | 0.03 | AT2G34470 | urease accessory protein G |