Table 2 Mutation in defense related genes in indica rice varieties
From: Indica rice genome assembly, annotation and mining of blast disease resistance genes
Domain Name | Domain ID | No. of genes mutated | |||
|---|---|---|---|---|---|
Blast resistant varieties (Tetep and Tadukan) | Blast susceptible varieties (HR-12 and Co-39) | ||||
SNPs | InDels | SNPs | InDels | ||
NB-ARC | PF00931 | 15 | 25 | 6 | 10 |
LRR | PF00560, PF08263, PF12799 | 3 | 17 | 2 | 15 |
Protein Kinase | PF00069, PF07714, PF13947, PF03727, PF00406, PF00781, PF00485 | 31 | 62 | 17 | 50 |
TOTAL | Â | 49 | 104 | 25 | 75 |