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Table 2 Number of SNPs and their false discovery rates (%) for each trait beforeb (P < 5 × 10−7 and P < 5 × 10−7) and afterc (P < 5 × 10−7) fitting the 23 lead SNPs in the model

From: Detailed phenotyping identifies genes with pleiotropic effects on body composition

 

P < 1 × 10−5

P < 5 × 10−7

Traita

No.b

FDRb

No.b

FDRb

No.c

FDRc

PSWT

245

2.1

105

0.2

44

0.6

HCWT

156

3.3

24

1.1

18

1.4

LLWT

64

8.0

28

0.9

12

2.1

TOP

58

8.8

10

2.6

  

RND

158

3.2

83

0.3

7

3.6

BONE

565

0.9

379

0.1

165

0.2

LEGBONE

888

0.6

626

0.04

596

0.04

LMY

256

2.0

125

0.2

12

2.1

DRESSING

256

2.0

112

0.2

14

1.8

DMLOIN

82

6.2

30

0.9

2

12.8

IMF

58

8.8

13

2.0

5

5.1

LLFAT

120

4.3

58

0.4

7

3.6

CFATSCORE

13

39.2

    

CCFAT

223

2.3

122

0.2

12

2.1

HGRFAT

275

1.9

167

0.2

18

1.4

CFAT5

43

11.9

9

2.8

1

25.5

CEMW

88

5.8

20

1.3

3

8.5

CEMD

23

22.2

2

12.8

  

CEMA

32

15.9

6

4.3

3

8.5

SHEARF5

37

13.8

13

2.0

3

8.5

SHEARF1

19

26.9

2

12.8

  

MYOGLOBIN

37

13.8

13

2.0

2

12.8

GLYCOGEN

52

9.8

20

1.3

2

12.8

ICDHACTIVITY

75

6.8

35

0.7

6

4.3

RCL4

41

12.4

10

2.6

3

8.5

RCL3

21

24.3

6

4.3

1

25.5

RCL2

19

26.9

3

8.5

0

 

RCL1

12

42.5

0

 

0

 

RCb4

6

85.0

0

 

0

 

RCb3

9

56.7

0

 

0

 

RCb2

5

102.0

0

 

0

 

RCb1

19

26.9

2

12.8

0

 

RCa4

48

10.6

18

1.4

0

 

RCa3

55

9.3

24

1.1

0

 

RCa2

57

8.9

29

0.9

0

 

RCa1

68

7.5

23

1.1

1

25.5

CFb

6

85.0

0

 

0

 

CFa

36

14.2

2

12.8

3

8.5

CFL

18

28.3

4

6.4

23

1.1

PH24LL

154

3.3

89

0.3

10

2.6

PH24ST

55

9.3

24

1.1

0

 

IRON

27

18.9

6

4.3

4

6.4

ZINC

9

56.7

2

12.8

0

 

EPADPADHA

11

46.4

1

25.5

0

 

EPADHA

12

42.5

3

8.5

2

12.8

FA_C22_6n3

47

10.9

17

1.5

1

25.5

FA_C22_5n3

6

85.0

1

25.5

1

25.5

FA_C20_5n3

20

25.5

5

5.1

0

 

FA_C20_4n6

37

13.8

2

12.8

0

 

FA_C20_3n6

35

14.6

9

2.8

4

6.4

FA_C18_2n6

11

46.4

1

25.5

0

 

FA_C18_0

23

22.2

7

3.6

0

 

FA_C16_0

21

24.3

3

8.5

1

25.5

FA_C14_0

54

9.4

20

1.3

0

 

FA_C12_0

31

16.5

3

8.5

1

25.5

FA_C10_0

22

23.2

9

2.8

1

25.5

  1. a = empty cells are not available