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Table 5 Effects of 23 lead SNPs on the individual traits (signed values with |t| > 1 are shown)

From: Detailed phenotyping identifies genes with pleiotropic effects on body composition

  Group 1a Group 2a Group 3a Group 4a Group 5a
Lead SNP orderb 1st 2nd 3rd 4th 5th 6th 7th 8th 9th 10th 11th 12th 13th 14th 15th 16th 17th 18th 19th 20th 21st 22nd 23rd
PSWT 1.8   8.3 6.3    2.4 −1.8     3.7   2.3 2.3        −1.4 2.2
HCWT    5.6 1.6    1.3 −1.4   1.1   3.0 1.0           4.0
LLWT 1.4    1.6      1.1 2.1   3.1 6.5 −1.3 1.6    −1.7      1.3
TOP 2.0   3.4 5.5 −1.2    −1.8   2.9   2.4 3.3        1.2 −1.6 1.4 2.5
RND 2.5   7.2 8.1     −1.7   3.1   1.9   1.4     −1.0     −1.0 2.5
BONE 2.7 2.7 10.9 13.7         2.2   2.6 1.3 −2.2       1.7 1.2
LEGBONE 5.7 2.4 12.3 19.1     −1.3     2.7     −1.6     −1.1 −1.0 2.3  
LMY 3.3 1.2 5.0 8.7   1.2 −1.5    1.9   −1.2 2.9     1.8     −2.5 −2.5 −1.0
DRESS% −3.6 −3.1 −3.4 −8.7 −2.4    1.2    1.1    −1.6       −1.3 1.5   4.7
DMLOIN −1.2   −2.6 −6.4        −2.1   −1.3   −2.1   2.7 1.9 1.1     
IMF   −1.7 −1.8 −4.0 2.2     −1.8   −2.0   −5.9   −1.6    2.7 1.3 −1.4 −1.5 1.2 −1.3
LLFAT −2.5   −4.1 −6.4    2.0 1.8     1.7   1.9   1.1     2.5 3.2   2.7
CFATSCORE −2.4 1.1 −4.1 −4.0    1.1 1.2   1.4 −1.5 −1.4          2.0   
CCFAT −2.5 −2.9 −3.1 −9.2    3.0 1.4    −2.1 1.9 −1.7 1.2 −1.5   −1.7     1.3   
HGRFAT −3.4 −1.9 −7.1 −9.3    1.8   2.2   −2.0 1.6   1.3    −1.5    1.9 1.5 1.5 1.0
CFAT5 −2.2 −2.2 −4.6 −4.6   −2.0 2.0   1.4    1.9 −1.2     −1.5    2.9    
CEMW 2.1   1.2 5.4 1.1 1.2        1.1 −2.2         −1.9 2.3
CEMD −2.9 −1.8 −5.0 −3.8 1.4     3.7    1.5   −2.5   1.6     1.6 −1.5   
CEMA −1.0 −1.9 −3.4   1.1     2.7    1.6 2.0 −3.5   1.0      −1.6   1.9
SHEARF5 2.5 1.2 3.3 3.7 1.2 −1.0    −3.4 −2.6   8.0 5.6 1.2     −1.1   1.8 1.2 −4.5  
SHEARF1 2.7 1.8 1.1 1.8 1.4   −1.2   −2.4 −1.3   5.5 3.3   −1.5     −1.3 2.6   −1.3  
MYOGLOBIN 2.4 −2.3 −3.6   −1.3    5.4 5.5 6.3 2.1 2.0   2.1 1.4 −1.9     −1.2   
GLYCOGEN 2.0     −1.9    1.5 7.2 1.0      1.0 8.8       −1.0
ICDHACTIVITY −1.2   −1.5 1.4   −1.4     5.4    −1.8    −6.9    −1.8 1.4   −1.0 −1.4
RCL4 −1.1   1.4 2.3    1.3   −4.9 −4.3 −5.1 −1.5 −3.0 −1.5 −2.5 −3.4    1.6     2.3
RCL3 −2.1   2.0 2.2      −4.0 −5.5 −4.6 −2.5 −3.7 −2.3 −2.2 −3.1    2.0     2.5
RCL2 −1.4   1.6 2.8      −3.7 −5.3 −4.2 −2.9 −3.7 −2.7 −2.5 −3.5   −1.5 1.3 1.2    1.7
RCL1    1.2 1.8      −3.8 −2.3 −3.8   −1.6   −2.7 −1.1 3.7 1.1 1.9 1.9   1.3 1.2
RCb4    1.2 −1.3       −2.6 1.1      2.9    1.6   1.6 −1.1  
RCb3   −1.7   −2.0         1.7 1.0 1.5 1.2 1.8   −2.8      
RCb2     −2.8 −1.2   1.1 −1.1     2.5   1.5 2.0 2.6 2.2       
RCb1    −1.7 −2.6     −2.0 −1.8 5.0   1.9     3.6 3.2   1.4   1.3   
RCa4   −1.6   −3.3     −1.6    4.1 3.9 2.1 1.3 1.4 7.4 4.1 1.5 2.1   2.4 −1.5 −1.1
RCa3 1.1 −2.7 −1.1 −3.9   1.2   −1.7   2.0 3.7 5.6 2.6 2.0   7.5 4.7   1.6   1.6   
RCa2 1.2 −2.4 −1.7 −4.1 −1.3    −1.6   3.6 3.2 5.3 2.3 1.6   7.2 6.0 1.4 1.5   1.3 −1.1  
RCa1   −1.1 −3.3 −4.1     −1.8 2.0 6.7 2.8 3.2 2.0 1.5   6.6 3.0     1.4   −2.6
CFb −1.2    −3.1    1.3   −2.9 1.3   −1.2   2.4   2.9       3.1  
CFa    −1.6 −3.9 −2.4      6.9 3.9 −1.0   3.4   4.3 −1.4 −1.2     1.9  
CFL −1.2 1.0 1.3 1.3      −5.9 −2.4 −6.1   −3.7    −2.3 1.7   2.5 −1.1    
PH24LL    2.5 3.0      −2.1 −11.1    −2.5    −1.1 −4.9    −3.1   −1.9 1.6
PH24ST     −1.4      −2.0 −9.0   −1.1    1.3   −5.6   −1.2    −1.1 −2.5
IRON    −2.8 −1.5    1.4   5.2 6.2 3.7   1.4 1.5    −1.9   −1.3 1.1 1.2 −2.7 −3.5
ZINC 1.3    −2.3      −3.7     −2.3       1.1   −1.7 −1.9  
EPADPADHA 1.1   −1.8   1.1 −1.3   2.5 3.3 −1.1     −1.2 −7.6 −2.2 3.6     −1.3 1.3
EPADHA   1.0     1.2    1.9 4.3    1.5 −1.3   −7.5 −2.1 2.6   1.6 1.9 −1.2 −1.8
FA_C22_6n3 2.5 1.1 −1.4   2.8 1.0   −1.8 2.4 3.6     −1.3 −1.3 −6.8 −1.0   1.5 2.6 6.8 −1.6  
FA_C22_5n3    −1.5      2.8 1.0 −1.4 −1.1   1.0 −1.3 −5.8   3.5    −2.7   
FA_C20_5n3      1.1    2.4 4.1 −1.6   2.2   −1.1 −8.2   3.3      2.4
FA_C20_4n6 2.0    1.3 1.5 1.3   −1.4 1.9 5.4 −2.3 1.2 1.1    −4.6 −2.9 −1.6 3.1     
FA_C20_3n6 2.1 −1.4    −1.2 2.6   −1.2 2.2 2.8 −2.0   2.1    −5.7   2.4 8.2     1.3
FA_C18_2n6     2.7      3.7      −2.0 −6.1    −1.8   −2.2   
FA_C18_0   −1.3 2.3 2.5   −2.5 −1.6 −1.8 −1.0    −2.1 −3.0 −2.7 5.5 1.4     1.2    1.2
FA_C16_0 −1.8      3.6 4.9 6.0   −1.6   −1.1 −1.3 −1.6 1.2    −2.0   1.2 −1.0 −1.1  
FA_C14_0 −2.7    −2.7   4.9 8.4 3.7   −2.9    −1.2           
FA_C12_0 −1.7 1.0   −3.6 −4.5 2.2 3.3 3.0   −3.3     −1.7     2.9   2.3    −1.9
FA_C10_0   1.5    −3.3 7.2 3.8 3.0 −2.1 −3.0 −1.2   −1.1   1.3    1.2   2.4   −2.0  
  1. aGroup of the lead SNPs that were clustered together as shown on Fig. 5, bThis SNP order refers SNPs, which are given on Table 4
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