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Table 1 Summary of E.gracilis RNA-Seq data

From: De novo assembly and comparative transcriptome analysis of Euglena gracilis in response to anaerobic conditions

Read data (bps)

9.03G

Total transcripts (seq)

113,295

FPKM≧1 out of total transcripts (seq)

49,754

Components (seq)

49,826

FPKM≧1 out of components (seq)

26,479

Median (nucl)

845

Contig N50 (nucl)

1604

Max length (nucl)

21,550

GC contents (%)

63.17

Components with SL-sequencea

14,186/26,479 (53.6 %)

  1. aCounted sequences from the representing potentially expressed components (26,479 seq) with conserved 12 nucleotides (TATTTTTTTTCG)